Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011350_1                                                                                                                 top


Strain : Bacillus thuringiensis GCF_001017635 RefSeq :NZ_CP011350 (plasmid pYC1 circula)
CRISPR id : NZ_CP011350_1
DR consensus (23 bp) : ATATTTCAATCCACGCACCTATANumber of repetitions :6
Begin Position : 697168 End Position : 697520

697168TAATTTCAATCCATGCACCTATATAAGGTGCGACTTGTTTTTCACAAAGCATTAATACCAGCTAC697232
697233ATATTTCAATCCACGCACCCATATAAGGTGCGACTTCTTTTGATCCGTAAGAACGTTCCATTTCC697297
697298ATATTTCAATCTACACACCTATATAAGGTGCGACGTCCCTTCCATCGGCGGCAGCTCATATTCAATT697364
697365ATATTTCAATCCACGCACCTATATAAGGTGCGACTCGATTCCACTTGTTCAGGCTCTTTGAATATC697430
697431ATATTTCAATCCACGCACCTACTAGAGGTGCGACATCCATTTGTTGTTACTTATGAACTACCGCCAA697497
697498TGATTTCAATCCACGTACCTACA697520
Left flanking sequence : Till position 697168 (length bp)
CAACAAAAACACTAAATTACTATCAATTATCTTATCAGTCTTACTCCATACACCTACAAGAGATGCGACG
AAAGTAATCTAGATAAGGCAGCAAGTAATT
Right flanking sequence : From position 697520 (length bp)
AGAGGTACGACTTTTCTTTAATAAATGGTTGATTAACTTTTTAATAAATACGCTTTCCTTCAATTATTCT
AACGTTTTCTTCATTACAGTCCATCAATAA
Print the CRISPR sequence : From position bp To position bp