Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011382_20                                                                                                                 top


Strain : Calothrix sp. 336/3 GCF_000734895 RefSeq :NZ_CP011382 (chromosome circular)
CRISPR id : NZ_CP011382_20
DR consensus (36 bp) : CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACNumber of repetitions :14
Begin Position : 6276594 End Position : 6277573

6276594CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACACGGAAAGAGCGATTAAAAGCACTGTGGAA6276659
6276660CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACGATTTGACGGCAACCTTTGTTTTCCCATTTATGCACCTCAT6276736
6276737CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCAGAGAAATAGCAAATTCCACAATCCCTCCACCACAG6276809
6276810CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTGTAGTTCTTGCTCCTCTTCCGTCGAGAGAGAAGAGG6276882
6276883CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTTCAATGAGAGCCTCAACGACAGATGCTGCCGCCGCTACGA6276959
6276960CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTAACTGTTGTCCAGCGGCCGTCATCCGAGATGGTG6277030
6277031CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACGGGTCGCTGCTGGTGAGCAGCGTGCCACCCGCCCCGGT6277104
6277105CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACGTTTTGAGAATTTCCTTTGCCTAGTTGGGCAATT6277174
6277175CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTGGCTGGCAGAGAATTTTTTGAAGTATTCAACAACA6277246
6277247CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCAAAGACAAAGCAGAACTAACAGAAACAAAAAGAACA6277319
6277320CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCTTGAAAACAAACGATAGAGGTTTCCTCGTTTGGTTC6277392
6277393CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTCCCAGGTGCAGTGGGTTGCTCTCAATCTTTCGA6277462
6277463CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCCATAGGTGCCATTCGGACGCTGGGGATTGGTGAATTGC6277537
6277538CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC6277573
Left flanking sequence : Till position 6276594 (length bp)
GCAAAATCGACTATTTTTTGAGAAATTTTTACAGATTTTTCGAGTGGTGTCGATTGGGGTATCTCAAACC
CTCTCACAGCAAGGCTTCCAAAAGTGAACT
Right flanking sequence : From position 6277573 (length bp)
GCTAGGTAACCCAAATTGAAGATGTCACTTTACCCAGGTAATGGCACTAAAGTGGAAGCACTTTATGGCA
CTAAAAAAGCTTGAAAAGCTGATGATTACG
Print the CRISPR sequence : From position bp To position bp