Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011382_4                                                                                                                 top


Strain : Calothrix sp. 336/3 GCF_000734895 RefSeq :NZ_CP011382 (chromosome circular)
CRISPR id : NZ_CP011382_4
DR consensus (30 bp) : GGTCTTCAAGGTAGGCAGGGTCTTCAAGGTNumber of repetitions :8
Begin Position : 2288494 End Position : 2288973

2288494GCTCCTCAAGGAATTCAAGGTCCCCAAGGGGAACGCGGTGAAAAAGGAGAGCGTGGAGAGAAAGGAGAACGCGGAGAACGT2288574
2288575GGTCTTCCAGGTAGGCAAGGTCCAGAAGGCAAACAGGGACGGGAAGGCAGACAGGGGAGACAAGGAGAACGCGGAGAACGT2288655
2288656GGTCTTCCAGGTAGGCAAGGTCCAGAAGGCAAGCAAGGACGGGAAGGCAGGCAA2288709
2288710GGTCTTCAGGGTCTTCAGGGTAGGCAGGGTCTTCAAGGTAGGCAGGGTCTTCAAGGTAGGCAA2288772
2288773GGTCTTCAAGGTAGGCAGGGTCTTCAAGGTAGGCAGGGTCTTCAAGGTAGGCAG2288826
2288827GGTCTTCAAGGTAGGCAAGGTCTTCAAGGTAGGCAGGGTCTTCAGGGTAGGCAG2288880
2288881GGTCTTCAAGGTTTACAAGGAAGACAAGGTCTTCAAGGTTTACAAGGAAGACAAGGATTTATG2288943
2288944GGACCTCAAGGTGCAACTGGACTTCAAGGA2288973
Left flanking sequence : Till position 2288494 (length bp)
AAATGGTTTGGGGCAGGTAGCTGCTGATATTGCGATGGTTTTAGGATTGCTAGGAAGGTACGTAAGAAAA
AGCGAATTTCCTGACCTTCTAAGACGATTT
Right flanking sequence : From position 2288973 (length bp)
CCTCAAGGACTTATGGGGATGCGAGGAGCGCCAGGAGTACCGGGAGCGCCAGGAGCGCCAGGAGCGCCAG
GAGCGCCAGGAGCGCCAGGAGCTACTGGAC
Print the CRISPR sequence : From position bp To position bp