Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011393_2                                                                                                                 top


Strain : Fervidobacterium pennivorans GCF_001644665 RefSeq :NZ_CP011393 (chromosome circular)
CRISPR id : NZ_CP011393_2
DR consensus (29 bp) : TTCCAACCCTCATAGTCACTTCTAAAACTNumber of repetitions :4
Begin Position : 165380 End Position : 165622

165380TTGCTTCCCCTCTAGCCTCTTCTAAAACTGGACGTCAATATAAGGTGCTACTAATCATTATACTATATCGAGA165452
165453TTCCAACCCTCATAGTCACTTCTAAAACTTCAAATACTTCCGTTTTCCTCTTTTCTTCGTCTTAATAATGT165523
165524TTCCATCCCTCATAGTCACTTCTAAAACTCAAGAAGATGGCAAACAGGAAATACAAAGGGATTTGGAAGT165593
165594TTCCATCTCTCATAGTCACTTCTAAAAAA165622
Left flanking sequence : Till position 165380 (length bp)
TGGAAAGAAACTTTTATCAAACGCCAGCCTGCGTCTATATACCTTATCCTGACTTCCAAAACGACACTCA
TTGCAAAACAAATAAAGGAAGCAATTTTGC
Right flanking sequence : From position 165622 (length bp)
CCGTAAGACCCTCATAAGTATTATACCATTATTTTTGTTAAATTTGACAGTTACATTTGTAAAAATTGAA
AAGCTCGTATTTATAACTATTTAGGTTGAA
Print the CRISPR sequence : From position bp To position bp