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CRISPRs details
NZ_CP011410_5
Flanking alignement tool
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NZ_CP011410_5                                                                                                                 
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Strain :
Leptospira interrogans serovar Bratislava PigK151 AS 05 115 GCF_001010765
RefSeq :
NZ_CP011410 (chromosome circular)
CRISPR id :
NZ_CP011410_5
DR consensus (24 bp) :
TTCCTAAAGAAATCGGAAAACTAC
Number of repetitions :
7
Begin Position :
1494008
End Position :
1494451
1494008
TTCCGAGACAAATCGGAAATCTAC
AAAATTTAACAGAGTTGAATTTAGGGAGCAATTCACTTACGACAG
1494076
1494077
TTCCTAAAGAAATCGGTTGGCTAC
GCAACTTACAAAGTTTGTGGTTGTTTGGAAACTGGCTAGCAACCC
1494145
1494146
TTCCTGAAGAAGTCGGGGAACTTC
ACAATTTAGAAGAGCTAAGTTTAAGCAGGAACCTTCTCATTACAC
1494214
1494215
TTCCAAAAGAAATCAGGCGGCTAC
AAAATTTACAAGTATTGAATCTATCTGACAATCGTCCCACTTTCACCGTTC
1494289
1494290
TTCCAAAAGAAATCGGAGAACTAC
GGAATTTAAAAGAGTTGAATTTAGAGAACAATTCACTTACGACAA
1494358
1494359
TTCCTAAAGAAATCGGAAAACTAC
AAAATTTAAAATGGTTGCGTTTAGGGAGCAATTCACTTACGACGC
1494427
1494428
TTCCAAAAGAAATCGGAAAACTAC
1494451
Left flanking sequence : Till position 1494008 (length
bp)
CAACTTGTGGAAGTAAAAGCTTACACAAATTTAATAGAGGCTTTCCAAAATTCTTCGGATGTTCGTATTC
TGCATTTGAACGGTCAAGGATTTAAAAATC
Right flanking sequence : From position 1494451 (length
bp)
GGAATTTAAAAGAGTTGGATTTGAGTTCGAATTCTCTTTCGGTCAAAGAGAAAAAGAGAATTCGAAAGTT
ACTTCCAAAATGTTCTATCATCTATTTTTG
Print the CRISPR sequence : From position
bp To position
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