Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011451_6                                                                                                                 top


Strain : Nitrosomonas communis GCF_001007935 RefSeq :NZ_CP011451 (chromosome circular)
CRISPR id : NZ_CP011451_6
DR consensus (23 bp) : ACTCCTTATACTCCAGATAGCTCNumber of repetitions :4
Begin Position : 2557943 End Position : 2558154

2557943AGTACTAATACTCCTGGCACCTCTGATAACCCTGATAGCCTTGGTACACCGGGTACCTCTAATAATTCCGAT2558014
2558015ACATCTAATATTCCCGATACCTCTGGTAGTTCTGTTAGCCCTAGTACTCCGGAAAGCTCTGTT2558077
2558078ACTCCTTATACTCCAGATAGCTCAGTTACACCTTATACCCCGGGTAGCTCCGTA2558131
2558132ACTCCTTATACCCCAGATAGCTC2558154
Left flanking sequence : Till position 2557943 (length bp)
AACTTTAACATTGATAGGAACAATAGTGCTAACTGGTACATTGATATTCACCAGCATAGTATTCGCTCAG
AATGCCTCGAATGAACAGAGGCCTGCTGGT
Right flanking sequence : From position 2558154 (length bp)
TGTTAATCCTGCTACCCAGGGTAAGTAATGACTCAGCATTTGTTATTAAAGATGTTTTTCGTGTTGTTTT
ACAGTTTGTTTTGAATTCATCTATTTTGAG
Print the CRISPR sequence : From position bp To position bp