Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011451_8                                                                                                                 top


Strain : Nitrosomonas communis GCF_001007935 RefSeq :NZ_CP011451 (chromosome circular)
CRISPR id : NZ_CP011451_8
DR consensus (37 bp) : GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACNumber of repetitions :12
Begin Position : 3445792 End Position : 3446622

3445792GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACCAATTCTGAATCCAGCCAAAGTCACCGGCATAAAA3445863
3445864GTTTTAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACCTTAACCTCGATAGTTGAGGTGCTGATTGCGGCT3445934
3445935GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACACACGGGCGCACTGGTTAGTGTGGGCGGCGCAAT3446005
3446006GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACAAGTACCGGCAGCACCGATATCCGTCAGCGCATGAAT3446079
3446080GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACGACAGAGATACAAGCGGGGGCGTTGAACACGGCG3446150
3446151GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACACCTACGGTCACCTTTGTTGCCTGGCCATGCTTTCCC3446224
3446225GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACCTCCTGATTCTTCGTCAAACATCTCACCATTGTCT3446296
3446297GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACTCAAAAACAGTGTATTTGTTATGGGCACAGTGCA3446367
3446368GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACCGTTTATTGCTCGATGTATTGTTTGGCACGGTCTG3446439
3446440GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACTCTTTATTCGGCCATCTTCTGCCCTGCTCAATCCTGA3446513
3446514GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTACAGCATGTGAAAGTGGAATATATAGGGCAAGCTAGA3446585
3446586GTTTCAATCCTCGCCCAGCTCGTTGGCTGGGCGCTAC3446622
Left flanking sequence : Till position 3445792 (length bp)
TTTTACTTGACCTTTGGCTGAATAGGCGGCCTCTCCCATGCTGATAGAACAGTAAGTTCCACCCAACCAT
TAACAACAAAGGAGAAGCCTGGAACTATTT
Right flanking sequence : From position 3446622 (length bp)
AGTACAACTACAACATCATCATACATCAGTAAAAATTGGTGTAAATGCGCGAACTGGCATCTACCAAATT
TTTTTAGAGAGTAAATAAACTGATTCACTC
Print the CRISPR sequence : From position bp To position bp