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CRISPRs details
NZ_CP012047_1
Flanking alignement tool
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NZ_CP012047_1                                                                                                                 
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Strain :
Tetragenococcus halophilus GCF_001712815
RefSeq :
NZ_CP012047 (chromosome circular)
CRISPR id :
NZ_CP012047_1
DR consensus (36 bp) :
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
Number of repetitions :
19
Begin Position :
421504
End Position :
422835
421504
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
CTAAGGAAAGTATTCCCTTTCACGTCTAATACACT
421574
421575
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
TCACTCACTCCATTCCTCGACCGTGCCATCTACAA
421645
421646
AATAGATACCTAACCCCATCATTAGGGGACGAGAAC
TAAGTTCTTCCACTGATTTATCTTTGTACATTTCAT
421717
421718
AATAGATACCTAACCCCATCATTAGGGGACGAGAAC
CCTAGCAACATCAGCACGCTCATCTGTCCCGCTATATAAT
421793
421794
AATAGATACCTAACCCCATCATTAGGGGACGAGAAC
CGGCAGGCGTTTGACCAGCCAAAGCAATAAGTTCCT
421865
421866
AATAGATACCTAACCCCATCATTAGGGGACGAGAAC
TCCTTGAGGAAATTTATTCAAGAGTTGATAGGAAGTT
421938
421939
AATAGATACCTAACCCCATCATTAGGGGACGAGAAC
TCTGCTCCACTAAAATTATTCGGTGTGATTTCT
422007
422008
AATAGATACCTAACCCCATCATTAGGGGACGAGAAC
CTGTTTGATATCTGTAATAAACGGGCTGTTTTACAG
422079
422080
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
ATTCATTTTAATTTCTCCTCTCTTTAACTTTCTAA
422150
422151
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
ATTCATTTTAATTTCTCCTCTCTTTAACTTTCTAA
422221
422222
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
TTCGAAATCGATGTTTAGGTGCATCTCAGCATTTC
422292
422293
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
AAAAAGAAGTTAATTACGATTTGGACTGTGTCAATCT
422365
422366
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
TTCGAAATCGATGTTTAGGTGCATCTCAGCATTTC
422436
422437
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
AAAAAGAAGTTAATTACGATTTGGACTGTGTCAATCT
422509
422510
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
TATCTTCTTTTATGTTATTCATTCTTTATCTTCCTCTC
422583
422584
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
TTTAGTAAATCGTTTATTTCATTTGTTAATACTTTCA
422656
422657
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
GTCCGGGTCTAAGTATTCTATGACCGTGTCTATTAC
422728
422729
AATAGATACCTAACCCCATTATTAGGGGACGAGAAC
TAAATTACTTTTTGAAGTAAATCCATATTCACTAG
422799
422800
AATAGATACCTAACCTCACGATTAGAGGACTGAGAA
422835
Left flanking sequence : Till position 421504 (length
bp)
TTGTGACCAAGGATTGAGCTTTAGAAGTAGTTTATGGTCAGTTTATGGACTAATGAAAAGTATTCTTATG
GCTGATATAAAAGCTTTTATGATATTATGT
Right flanking sequence : From position 422835 (length
bp)
TTAATATAATGTTTGAATCAATATAGTGAGGAGTAAATATAATGAGAGATTGTATATATGTTGAGCACCA
AAATTTTGTTTCTGTTGTAACTAATAGCTT
Print the CRISPR sequence : From position
bp To position
bp