Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012147_3                                                                                                                 top


Strain : Leptospirillum sp. Group II 'CF-1' GCF_001186405 RefSeq :NZ_CP012147 (chromosome circular)
CRISPR id : NZ_CP012147_3
DR consensus (29 bp) : GTATTCCCCACGTTCGTGGGGATGAACCGNumber of repetitions :32
Begin Position : 41578 End Position : 43499

41578GTATTCCCCACGTTCGTGGGGATGAACCGGCCATTTCAATGCGGCGTTGCCAGCCCTTCAC41638
41639GTATTCCCCACGTTCGTGGGGATGAACCGGAAGATGCGCAATACGGAAAGAAAAATCAGAT41699
41700GTATTCCCCACGTTCGTGGGGATGAACCGTCCCGCACTGCGGCAGGGCGATATAGTCCATC41760
41761GTATTCCCCACGTTCGTGGGGATGAACCGGATTAGGTCGGGGACAACCATGACTTGAACGA41821
41822GTATTCCCCACGTTCGTGGGGATGAACCTTTGTCGCACTCTTCTTGAAGTCTTCGGACCCC41882
41883GTATTCCCCACGTTCGTGGGGATGAACCGATCAAGCTCCGTTATTTTCAGTATGCCGGAGA41943
41944GTATTCCCCACGTTCGTGGGGATGAACCGCGAGAGAACTTCCGGTTCGGTGTGTTTGATAT42004
42005GTATTCCCCACGTTCGTGGGGATGAACCGGTCTACGGAGAGATCCCGGGCCTTCATATCGT42065
42066GTATTCCCCACGTTCGTGGGGATGAACCGCCCTGAAACAGGATATCGAGACCCTGTTTCAG42126
42127GTATTCCCCACGTTCGTGGGGATGAACCGTTTTGTTAGCTGCACTGGCTCAAATTATTATC42187
42188GTATTCCCCACGTTCGTGGGGATGAACCGACCACAAGGGAACTCCGCTCGAACTCTGTGCC42248
42249GTATTCCCCACGTTCGTGGGGATGAACCCCAATACCAATCTGGGGAACCTCGTCTCCGGTC42309
42310GTATTCCCCACGTTCGTGGGGATGAACCGTCCGGCTGGTCGGAGATGGTGCGGGAGGGGGA42370
42371GTATTCCCCACGTTCGTGGGGATGAACCGCTGGAATGGTTTTGCGAGGAAAGGGAGGATTA42431
42432GTATTCCCCACGTTCGTGGGGATGAACCGAACCCCCTGCGTCACCCCCGCGAGCGAACTGC42492
42493GTATTCCCCACGTTCGTGGGGATGAACCGGATATGAGGAACAATTCCCGCTCGCTGATATA42553
42554GTATTCCCCACGTTCGTGGGGATGAACCATCCGTGCCCAGGTCATCCGGATTCAGGAAGTC42614
42615GTATTCCCCACGTTCGTGGGGATGAACCGCCTCCGAGCGGGTCGGAATCGTCCGGGAAATG42675
42676GTATTCCCCACGTTCGTGGGGATGAACCGATATTGTCTATGAATAAACTTCGCATTGGATT42736
42737GTATTCCCCACGTTCGTGGGGATGAACCGACATGGGTTATTTTCCTTTCGAGATAAGATCGC42798
42799GTATTCCCCACGTTCGTGGGGATGAACCGGAAAGAAACAATGTCAGGGACGCTATTTTGAT42859
42860GTATTCCCCACGTTCGTGGGGATGAACCGTTCCTTGGAGGGTGTTGGTGCCACCGGACTTC42920
42921GTATTCCCCACGTTCGTGGGGATGAACCGACGAGCATGTCCACGTCGGGCACGTCGAAGCC42981
42982GTATTCCCCACGTTCGTGGGGATGAACCGCCGGTTTTGCAGCCTGTGCGGGAGGTGCGGAG43042
43043GTATTCCCCACGTTCGTGGGGATGAACCGCAGGCACCGCTCCGCGCCATGGGATTGTCCTC43103
43104GTATTCCCCACGTTCGTGGGGATGAACCGATGGGTTTCTTATCAAGGATTATGCTGTTAAA43164
43165GTATTCCCCACGTTCGTGGGGATGAACCGTACGGGGAACGCATGGACGCCATCCGGAAGTG43225
43226GTATTCCCCACGTTCGTGGGGATGAACCGTCTATCGGGAAGATCGGCGCGACGAAGATCAT43286
43287GTATTCCCCACGTTCGTGGGGATGAACCACACTGGAAATCCTGGGCCAGAATCAGGAAGCC43347
43348GTATTCCCCACGTTCGTGGGGATGAACCGCAGGAACGGTTGAACCGGGTCCAGAGAATGGAA43409
43410GTATTCCCCACGTTCGTGGGGATGAACCGGGGGTGATTGAAAATGGTATCGTCTAGTTCAA43470
43471GTATTCCCCACGCTCGTGGGGATGAACCG43499
Left flanking sequence : Till position 41578 (length bp)
AAATCGAAAACGGAAGCAGAATGCGCCGCTTAGGCTCTTGCTCTATGAGTTTGTACACTAATATTTACAT
TAACTCCCCATGCTTTTCGAGCGATAGAAA
Right flanking sequence : From position 43499 (length bp)
ACATCCTAGACCCAGGAGAGATCTCCGAATTAAGAGAGTGATTCTTTCACATTTTCTTATGGCAGTGGAA
GAGAGCCCATAGTCAACTGCTGAAGTCTTG
Print the CRISPR sequence : From position bp To position bp