Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012200_2                                                                                                                 top


Strain : Thermococcus sp. 2319x1 GCF_001484685 RefSeq :NZ_CP012200 (chromosome circular)
CRISPR id : NZ_CP012200_2
DR consensus (30 bp) : CTTTCAATTCTTTTGAAGTCTTATTGGAACNumber of repetitions :5
Begin Position : 575278 End Position : 575584

575278CTTTCAATTCTTTTGAAGTCTTATTGGAACTTTATAAAAGAATGGGTGATGGGGGAGAAAGGGGAGTGAC575347
575348CTTTCAGTTCTTTTGAAGTCTTATTGGAACAACGGGCTTTCCGGCGGGAACAAACAAAAAAAGGAGGC575415
575416CTTTCAATTCTTTTGAAGTCTTATTGGAACGAGGTCGTAACGATTGGAACCTTGAACGTGCCGCTCCA575483
575484CTTTCAATTCTTTTGAAGTCTTATTGGAACCTCAAGCCTATCTTAAACCGTGCTTTCTGTTCCTCCTGTGC575554
575555CTTTCAATTCTTTTGAAGTCTTATTGGAAC575584
Left flanking sequence : Till position 575278 (length bp)
GAGATAGACCTTGTCCATTCTCTCACCCTCCTTTGATATATGGTAGAGTAGAAGAGTTGGAGTTTAAAAA
CCCAGCGTTTTCAAGTGCTGAGGTTTTAAG
Right flanking sequence : From position 575584 (length bp)
AGGGGTGAATTTTCCTTGAAATTCCTTGCAAAGTAATTAGATGGCTTGAATCTTATAAGCTTTTCGTCAA
AGGGTCAATAAAACAGCATTTCAAAGCCTC
Print the CRISPR sequence : From position bp To position bp