Institut de Génétique et Microbiologie

CRISPR details


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NZ_CP012294_2                                                                                                                 top


Strain : Pediococcus damnosus GCF_001611155 RefSeq :NZ_CP012294 (chromosome circular)
CRISPR id : NZ_CP012294_2
DR consensus (36 bp) : GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCNumber of repetitions :35
Begin Position : 1237641 End Position : 1239921

1237641GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCAGGTATCGTTTGTAATCCTACGAGTGCAAT1237706
1237707GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCGTGATACCAGTGCCGTTTAACGCTGACATC1237772
1237773GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCATAAAACATGATAAAGACGTTCAGCATGA1237838
1237839GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTATTATATGCAGATCCTAATGTTGAACTAA1237904
1237905GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCACTGATTAGTTTGGTCTCACAATCCAAGC1237970
1237971GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCACGCAAGACCAAATTGATTCTGGCCCAGCA1238036
1238037GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCATGGACGTTCATGTATGGCTCATTCTCAAA1238102
1238103GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCGCCCGTTTGGGTTTGGCCTTGAACATAATC1238168
1238169GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTGTATTACAGGGCTTACATTGCCTACGCGG1238234
1238235GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCAAAAGTTTGTGCTGCCAATGGCAGGAACGT1238300
1238301GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCATTAACAATCGCAAACTCACCATTTCCTT1238366
1238367GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCGTTTGTCCGAACCGTGCGTCATGCACATCT1238432
1238433GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTACTCAATCGCAAATTGATTCCGCACCAGA1238498
1238499GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTGTTAGGCCTTCCACAGTAAAGCTAATTTT1238564
1238565GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCATTCGACTATCCCGGATTGATTGGAGATTC1238630
1238631GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCTCGGTACGCAATAACCTTGCCGCCACGTC1238696
1238697GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCACCCTTCGATTACTAACCCGCTTAATCTGA1238762
1238763GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTATGATGATTGCGTGCAGTAGGTGGTATAC1238828
1238829GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCAAAACGTTGATTGATAACGGTGTAGCAGAT1238894
1238895GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGTGGTAAGACTGTTTACAGTCCCTCGATAAGT1238960
1238961GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTCATCTCCTCCGATTGCATCTGTATCTAGT1239026
1239027GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTGCCGACATTGCCGAGACCCCAACCAGCTT1239092
1239093GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTTAGCTTATGCCAACATTGGTGGTAATGAT1239158
1239159GTTTTAGAAGAGTGTCGAATCAATATAGTTGAGAGCTTCGCTTTCTGTTGAATAGTAATATGTGTT1239224
1239225GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCGCCATTGGTGTCTAATGACTGTGGTGCTGT1239290
1239291GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCGTGTACATGATGTGGTCGTCCCCAATGTT1239356
1239357GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCTAGATACAGGTAATCTGTGGGTATTGTGTG1239423
1239424GTTTTAGAAGAGTGTCGAATCAATATAGTTAAAAGCTTCACCTACAATTAATGTATTACCCTTTAA1239489
1239490GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTAATAACGGAGCGTTAAAGGCTTGGAGTTA1239555
1239556GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCGGGGTCGCTTCCACATATCCTGTGGTCCA1239621
1239622GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCCGTTGGTCCGACAACTTCCGCAGCTCTTT1239687
1239688GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCCCGGTCGTCGTCGGTTAAGTACCACTCATG1239753
1239754GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCGTGTGGCGTTGGCTAACGTTGTTGAGGGCA1239819
1239820GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGCTAATGTAAAAAAGCTTGACTGTATACACAT1239885
1239886GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGGAA1239921
Left flanking sequence : Till position 1237641 (length bp)
TAATCACGAAGAATTCGATAAATGCCGTTATTGCTACGTTGATCAGGATTTTGTTGATTGGCGTTATTAA
TGTCTATGAGAGTAGCATTATAAAAAAACG
Right flanking sequence : From position 1239921 (length bp)
TCAGGAGCGGCTTGACGCATTGAGGTAAAATAGTTTTAATTATTATCGTATATATAAAATAAATGAACCT
CAATTGCACCAAAATCTGAACTTCATTAAA
Print the CRISPR sequence : From position bp To position bp