Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012513_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Thompson GCF_001305815 RefSeq :NZ_CP012513 (chromosome circular)
CRISPR id : NZ_CP012513_1
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :28
Begin Position : 2931981 End Position : 2933659

2931981GTGTTTATCCCCGTTGGCGCGGGGAACATTTTTCAGCCCTTGCCGACTGCGGAACGCCCCT2932041
2932042CGGTTTATCCCCGCTGGCGCGGGGAACACATGGATGGCTCATATCCGGTTTCTGTTTCTGC2932102
2932103CGGTTTATCCCCGCTGGCGCGGGGAACACTTCGGTAACGTCTGGATTATTTTCTGAGGGTT2932163
2932164CGGTTTATCCCCGCTGGCGCGGGGAACACGTGCTGCTGCTGATCAGTTTACCCGCTGGGTG2932224
2932225CGGTTTATCCCCGCTGGCGCGGGGAACACGTTTATTACTGCTTAGTTAATTAATGGGTTGC2932285
2932286CGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGAATAATCTCTAATAGTCTCAATTCGTT2932346
2932347CGGTTTATCCCCGCTGGCGCGGGGAACACGCCGATCGATGGCAAAGTTACCGATCCCTATCC2932408
2932409CGGTTTATCCCCGCTGGCGCGGGGAACACTGATATTCCGGAACCTGACCCGCAACTACAGT2932469
2932470CGGTTTATCCCCGCTGGCGCGGGGAACACACGTCGCTGTTAATCTCCTCGTTAAGAAGCTG2932530
2932531CGGTTTATCCCCGCTGGCGCGGGGAACACCCCGACAGTTGCTCAGGTGGCTGCCGCCAAGG2932591
2932592CGGTTTATCCCCGCTGGCGCGGGGAACACGACGACAAAATTAATATTGTTGGCTGGCGTGT2932652
2932653CGGTTTATCCCCGCTGACGCGGGGAACACCGTAAATTTTGCTGTAATCAACTGTGCTGTCC2932713
2932714CGGTTTATCCCCGCTGGCGCGGGGAACACTTCAGAGAATTGCCGCCAATAGAACAGCGCAA2932774
2932775CGGTTTATCCCCGCTGGCGCGGGGAACACGTCTCCGCAAAGGAAGCAGAGCTGTTCTGCGA2932835
2932836CGGTTTATCCCCGCTGGCGCGGGGAACACGCTGTCGTATATCCGTTACGCAACCCGCGTGCG2932897
2932898CGGTTTATCCCCGCTGGCGCGGGGAACACGCTTGCCAGTGGATTTTTGGTTATCTATGTAGT2932959
2932960CGGTTTATCCCCGCTGGCGCGGGGAACACGCGAATGCAGCCCCTCTAAAATTGTTGCCCGC2933020
2933021CGGTTTATCCCCGCTGGCGCGGGGAACACACTGGAGGAGAATTTGATGCAGGTGAAGCGTC2933081
2933082CGGTTTATCCCCGCTGGCGCGGGGAACACCAGTGGTGTTTAAGCCCGACGTCGGCAACAGC2933142
2933143CGGTTTATCCCCGCTGGCGCGGGGAACACGTGAGTTCGGCAAGAAAAATGTGGTCCGGCTT2933203
2933204CGGTTTATCCCCGCTGGCGCGGGGAACACTAATACTGATTATCTGCTAACACACGGCTCTA2933264
2933265CGGTTTATCCCCGCTGGCGCGGGGAACACTACAGTAAACCAATGCCATGCCAACATCGCTC2933325
2933326CGGTTTATCCCCGCTGGCGCGGGGAACACTGCTACAAATGGCACTCCATTTATTATTCCGC2933386
2933387CGGTTTATCCCCGCTGGCGCGGGGAACACCAAAGTTAGCGAGGTTTGACGCATCAACCAAA2933447
2933448CGGTTTATCCCCGCTGGCGCGGGGAACACGCCACGACGTTTGCCTGTGTCCCGATAGCCTC2933508
2933509CGGTTTATCCCCGCTGGCGCGGGGAACACATCAGTCCGGGCGCGCAGTTTACGTCGTACCG2933569
2933570CGGTTTATCCCCGCTGGCGCGGGGAACACGCGACGACTGAAAAATGGCGGGGTAATAAACT2933630
2933631CGGTTTATCCCCGCTGGCGCGGGGAACAC2933659
Left flanking sequence : Till position 2931981 (length bp)
GGAGGATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 2933659 (length bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTATTACCTAACAAACTACCAACGGTAAGATAACAA
TTCCTTATTATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position bp To position bp