CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP012559_1
Flanking alignement tool
Page manual
  
Home Page
NZ_CP012559_1                                                                                                                 
top
Strain :
Lactobacillus heilongjiangensis GCF_000831645
RefSeq :
NZ_CP012559 (chromosome circular)
CRISPR id :
NZ_CP012559_1
DR consensus (36 bp) :
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
Number of repetitions :
23
Begin Position :
2539093
End Position :
2540580
2539093
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TAAAACACATGACAACATGCTGCACGATCA
2539158
2539159
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
CATGAAATCTTGAATCAATAGCTATAGTTT
2539224
2539225
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
GATCCTAACAACAATGGAAAAGATCTCTAT
2539290
2539291
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
CACCAGTATCGTAAGCCAACTGATACAGGC
2539356
2539357
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
GAGAGAGGATCTCAGTCAAAGCAGCGAAAT
2539422
2539423
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TATTTTATGGTGATAAGAAATTACGAATGT
2539488
2539489
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TTGATGAAGAAGCGCGTGTTAGTACTGATA
2539554
2539555
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
ATATTGACAAGTAATCGTTAATGTCTACTT
2539620
2539621
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
CCCGTATTTAGTTCACGTGGTCATAGTAAA
2539686
2539687
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
AGATGAACTTTTGTCCAAGCGAAAACCTCA
2539752
2539753
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
AATTGTTCTGTATGAATACTTATTTTTGAG
2539818
2539819
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
CATGTATTTGACTTCGTTAACGATAGCGTT
2539884
2539885
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TGAATACACGTCCATCAGGTCGTTCATCAT
2539950
2539951
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TGTTATACGTGTCACAGGCGCAAGACTGAG
2540016
2540017
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TTTACTATGCCTGATGACAAAGCTGATGTT
2540082
2540083
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
AAATCTTACACAGCCTTTGTTAAATGCCAT
2540148
2540149
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
GTTCAATCTATTAATAACTCTTCAACTTCT
2540214
2540215
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
TGATATTGATACAGCTAAACGTTCAATGAG
2540280
2540281
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
GTTGCCTTTAGTCCGAAATGCTGATTTAAA
2540346
2540347
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
GAATACTATCATCCGGTTCACTGACCTCTT
2540412
2540413
GTTTTAGAAGTATGTCATCTCAATTACTTAAGAACC
GAACAGGCAGCCATTGAGTTAATCGCTGCT
2540478
2540479
GTTTTAGAAGTATGTCATCTCATTTACTTATGAAAC
AAAATGTATTGACCCCCCACTTCTAACAGG
2540544
2540545
GTTTTAGAAGTATGTCATCTCAATTATTTATGATCC
2540580
Left flanking sequence : Till position 2539093 (length
bp)
ATCCAATGTTATTGAAGGAGAAAGGCCTTAATATCAAGGTTTACTCCATTGATAATGATCACGTTAGATT
TGATTATTAGAGGATGATTAGAAAACAACG
Right flanking sequence : From position 2540580 (length
bp)
AAAAAAATAAGCTGTCACAGAACACCCCCATTGAGGTTTTGTTCATGTGACAGCTTATTTTTATTTCAAA
CTCTTCAAAACTCTATCGCCCAAATCTCTA
Print the CRISPR sequence : From position
bp To position
bp