Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012590_28                                                                                                                 top


Strain : Actinomyces sp. oral taxon 414 GCF_001278845 RefSeq :NZ_CP012590 (chromosome circular)
CRISPR id : NZ_CP012590_28
DR consensus (37 bp) : GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACNumber of repetitions :10
Begin Position : 2277582 End Position : 2278269

2277582GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACCGAGCTCGTCGACGATCTTATTGCGATTCGGATCC2277653
2277654GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACTTGCCCCACTTGGGGGCGGTAGCGTCCTGTGCTGGCG2277727
2277728GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACCACTTGACGTAGAGGTCGTCTGCGTCAAAGC2277795
2277796GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACTTGCCCCACTTGGGGGCGGTAGCGTCCTGTGCTGGCG2277869
2277870GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACCACTTGACGTAGAGGTCGTCTGCGTCAAAGC2277937
2277938GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACGCGTTAGCCCTTTAGCACATCTCTCCAGGCCGCCCG2278010
2278011GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACTGGTGGAATACCTGTAGGGCCTCGTCCGCCGTCGCCG2278084
2278085GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACCCCACGGGGTGACGAGGGCAGCGAGGACGACGAGGAT2278158
2278159GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGACTCGAGGGGTCCAAACATGACGGTTCCTTTCAGGTGGG2278232
2278233GTCAGGGAGCACCACGCACCTGGAAGGTTATTCTGGG2278269
Left flanking sequence : Till position 2277582 (length bp)
AGTCTGAGTCCGGTGCTGGCCGGTTCGGAGGGGTGCTTCCGGGGCCGGTGGCGCTCCGGGCCCTCGAAGT
GGCGTCATACCGCCACTCTCGGAGGCAGGG
Right flanking sequence : From position 2278269 (length bp)
GGCGTCTGGGTATGTCGAGTCCTCCTCATCGGGGAAGGGTTCCGGGGCGGGGTCGGTGGGGAGGGCACAT
TCTGCGTCCGGTTCGCCAGCCCCTGCCCGT
Print the CRISPR sequence : From position bp To position bp