Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012689_2                                                                                                                 top


Strain : Campylobacter jejuni subsp. jejuni RM3197 GCF_001299565 RefSeq :NZ_CP012689 (chromosome circular)
CRISPR id : NZ_CP012689_2
DR consensus (35 bp) : TTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAGNumber of repetitions :2
Begin Position : 1485456 End Position : 1485556

1485456TTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAGGCGGTTTAATTAAACTTAAAAATGAAAAGTT1485521
1485522TTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAG1485556
Left flanking sequence : Till position 1485456 (length bp)
TTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTGCAACCTCCTTTTAGTGGAGTAAT
TAGCCCTAGCAGAGTTTCAATCCACTAGGG
Right flanking sequence : From position 1485556 (length bp)
ATATTTACCAGATAATGAAAATTTCGGGGTTTTTTGATGAAAAATAGCAAAAATTATGCTATAATCTCAA
TAAGAAATTTAAAAAGGGACTAAAATAAAG
Print the CRISPR sequence : From position bp To position bp