Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012959_1                                                                                                                 top


Strain : Aggregatibacter actinomycetemcomitans GCF_001594265 RefSeq :NZ_CP012959 (chromosome circular)
CRISPR id : NZ_CP012959_1
DR consensus (32 bp) : ATTTCAACACACAGCCACCCGAAGGTGGCTGCNumber of repetitions :4
Begin Position : 153343 End Position : 153574

153343ATTTCAGCACATAGTCACCCGAAGATGGCTACTACCTAGACCGTCTGGTGTATTAATTGACTTCTAT153409
153410ATTTCAACACACAGCCACCCGAAGGTGGCTGCACGCTCAAAACGACGAGATTCCACTGCGTCTTCG153475
153476ATTTCAACACACAGCCACCCGAAGGTGGCTGCGTAAAAAAAATCCCGCCATTAAGACGGGAAAAATA153542
153543ATTTCAACACACAGCCACCCGAAGGTGGCTGC153574
Left flanking sequence : Till position 153343 (length bp)
AAGTCGCACAGAGCATTTTGTTAAACGCTGCCCTACCATTAGGCAACAAGCTCACATATTTTTAATCGGT
TAAATACCCATAAAAAACGCATGCCAAGTA
Right flanking sequence : From position 153574 (length bp)
TCCCTATATAAAAAAACAAGAAAAATCAGTAGATTACTTCCTGTATTTCGCTAACTTATTTCAAAATAGA
GAGTGGGATAAGTATAACGGGCATGTCGTC
Print the CRISPR sequence : From position bp To position bp