Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013253_3                                                                                                                 top


Strain : Escherichia coli GCF_001455385 RefSeq :NZ_CP013253 (chromosome circular)
CRISPR id : NZ_CP013253_3
DR consensus (25 bp) : GAGTTCCCCGCGCCAGCGGGGATAANumber of repetitions :7
Begin Position : 544683 End Position : 545073

544683GAGTTCCCCGCGCCAGCGGGGATAAACCGCTTTCGCAGACGCGCGGCGATACGCTCACGCA544743
544744GAGTTCCCCGCGCCAGCGGGGATAAACCGCAGCCGAAGCCAAAGGTGATGCCGAACACGCT544804
544805GAGTTCCCCGCGCCAGCGGGGATAAACCGGGCTCCCTGTCGGTTGTAATTGATAATGTTGA544865
544866GAGTTCCCCGCGCCAGCGGGGATAAACCGTTTGGATCGGGTCTGGAATTTCTGAGCGGTCGC544927
544928GAGTTCCCCGCGCCAGCGGGGATAACCGCCCGGTAGCCAGGTTTGCAACGCCTGAACCGA544987
544988GAGTTCCCCGCGCCAGCAGGGATAAACCGGCAACGACGGTGAGATTTCACGCCTGACGCTG545048
545049GTGTTCCCCGCATCAGCGGGGATAA545073
Left flanking sequence : Till position 544683 (length bp)
AAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAA
ATGCTTTAAGAACAAATGTATACTTTTAGA
Right flanking sequence : From position 545073 (length bp)
ACCGGGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCCGCCTCTGCGGTAGAACTCCCAGCT
CCCATTTTCAAACCCATCAAGACGCCTTCG
Print the CRISPR sequence : From position bp To position bp