Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013479_3                                                                                                                 top


Strain : Pseudomonas aeruginosa GCF_001900265 RefSeq :NZ_CP013479 (chromosome circular)
CRISPR id : NZ_CP013479_3
DR consensus (29 bp) : GTGTTCCCCACATGCGTGGGGATGAACCGNumber of repetitions :18
Begin Position : 1821971 End Position : 1823036

1821971GTGTTCCCCACATGCGTGGGGATGAACCGACCCGGCGAAACCCTGCATATCGGCGACAACA1822031
1822032GTGTTCCCCACATGCGTGGGGATGAACCGGATCGCCTCGTTCTCCGACCCGACGCCTTCCA1822092
1822093GTGTTCCCCACATGCGTGGGGATGAACCGTCGACCTTGTCGACCCAGGCGACCGCCTTGAG1822153
1822154GTGTTCCCCACATGCGTGGGGATGAACCGCCCATATGTCGCAATGTTCTATACCAACAGAA1822214
1822215GTGTTCCCCACATGCGTGGGGATGAACCGGCGCAGCTCGATCCTGAGCAGGTCGATGCGTA1822275
1822276GTGTTCCCCACATGCGTGGGGATGAACCGTCCTCCACCCGCTGGGTGATTTCCTCGGTACG1822336
1822337GTGTTCCCCACATGCGTGGGGATGAACCGCGGGATAACAGTGGGAATCAGTCTGTAGGCTT1822397
1822398GTGTTCCCCACATGCGTGGGGATGAACCGTCGTAGCGCGGACTGATGTCGTTGCAGTACTT1822458
1822459GTGTTCCCCACATGCGTGGGGATGAACCGCCCGCGCGGCAATAAGGTGAAACTGGGAGACG1822519
1822520GTGTTCCCCACATGCGTGGGGATGAACCGGTCTCCCACGGCGATCCGCGGTAGATCATGTT1822580
1822581GTGTTCCCCACATGCGTGGGGATGAACCGTTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA1822641
1822642GTGTTCCCCACATGCGTGGGGATGAACCGGTCGCCAGGCCCACGTCGGCGGATCACCAACA1822702
1822703GTGTTCCCCACATGCGTGGGGATGAACCGATGTGCTTCCAGCTTTCGTCGTCCAGCTTCCG1822763
1822764GTGTTCCCCACATGCGTGGGGATGAACCGATAAAAGAGGCCGTCAAATACCGATGCGTCCT1822824
1822825GTGTTCCCCACATGCGTGGGGATGAACCGCAGCGGGCCACCTGGCTGCAGTTGCTGACCAG1822885
1822886GTGTTCCCCACATGCGTGGGGATGAACCGGTGATGGAGCGGACCGCCCCGAGCACCGCAGA1822946
1822947GTGTTCCCTACATGCGTGGGGATGAACCGAAGGACCGCGTCCGCGTGCTGCTGGAGACGAT1823007
1823008GTGTTCCCCACATGCGTGGGGATGAACCG1823036
Left flanking sequence : Till position 1821971 (length bp)
GTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTT
CTTCTTTAAAAACAATTCTGTACGGTAAGT
Right flanking sequence : From position 1823036 (length bp)
TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACAT
TCCTGGCTGTCCTGTATTTCCCCTTTGGCA
Print the CRISPR sequence : From position bp To position bp