Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013612_1                                                                                                                 top


Strain : Pseudoalteromonas rubra GCF_001482385 RefSeq :NZ_CP013612 (chromosome circular)
CRISPR id : NZ_CP013612_1
DR consensus (32 bp) : GTCGCGTCCTGCACGGGCGCGTGGATTGAAACNumber of repetitions :24
Begin Position : 1081540 End Position : 1083078

1081540GTCGCGTCCTGCACGGGCGCGTGGATTGAAACGTTGATAGAGCAGAATGTAGTTTACGTCACGTA1081604
1081605GTCGCGTCCTGCACGGGCGCGTGGATTGAAACCGAGCAGTCGATGCGCAAACGCATGTCCTGAATT1081670
1081671GTCGCGTCCTGCACGGGCGCGTGGATTGAAACCGCTTCCCAGGGCGACCCCTCAGCCTCTACTAAC1081736
1081737GTCGCGTCCTGCACGGGCGCGTGGATTGAAACTACGAACATCACGATTTATGGGCCAAAACAGGC1081801
1081802GTCGCGTCCTGCACGGGCGCGTGGATTGAAACTCAAAAAGTAACTACCAAAAACTAAATCAAGGTA1081867
1081868GTCGCGTCCTGCACGGGCGCGTGGATTGAAACGGCTCAGGGTATTGTCTGGCGATTACGACCTAT1081932
1081933GTCGCGTCCTGCACGGGCGCGTGGATTGAAACTTTTTGAATCGTTCATATTTACACACGAGCAGT1081997
1081998GTCGCGTCCTGCACGGGCGCGTGGATTGAAACATGGTAGAGCCTAAACGTGGCTTGTATTCATTA1082062
1082063GTCGCGTCCTGCACGGGCGCGTGGATTGAAACCAACCATCAGCTGATTGACCGATTTGACCGTGA1082127
1082128GTCGCGTCCTGCACGGGCGCGTGGATTGAAACAGCATGACTTGTTGTTTGCTCGTTTCGCGCTAA1082192
1082193GTCGCGTCCTGCACGGGCGCGTGGATTGAAACGTCGCATGTGTGGTAAGGCGCTGTCTGAAATTC1082257
1082258GTCGCGTCCTGCACGGGCGCGTGGATTGAAACGACCTCAGTGTAATTAGTCAGGATGAGGCGCTAA1082323
1082324GTCGCGTCCTGCACAGGCGCGTGGATTGAAACCGCATGATGAAGCATGAAGGCTGGGATGAAGTT1082388
1082389GTCGCGTCCTGCACGGGCGCGTGGATTGAAACTTTTTGGACTCGACCAAACTGGATCACAACTAC1082453
1082454GTCGCGTCCTGCACGGGCGCGTGGATTGAAACCCTGCCACAGGGGCAGACCAAGCAGGTCCCCGAT1082519
1082520GTCGCGTCCTGCACGGGCGCGTGGATTGAAACGCCATTGATTGATAGTTCTCAATCATGAAATGA1082584
1082585GTCGCGTCCTGCACGGGCGCGTGGATTGAAACTGCATCGCGATGGAGGGCGTCTAAAACCCTCAA1082649
1082650GTCGCGTCCTGCACGGGCGCGTGGATTGAAACCACCGCAAAACTCATGAGGCGGCGCATGGTCTTAT1082716
1082717GTCGCGTCCTGCACGGGCGCGTGGATTGAAACAACCGTGAAAATATACATCGGCAGTACAGTGAT1082781
1082782GTCGCGTCCTGCACGGGCGCGTGGATTGAAACACCGGACAATCCAGTTGCAACATTGCCATTAACC1082847
1082848GTCGCGTCCTGCACGGGCGCGTGGATTGAAACATTGTTCGGCTGCGGGGCATGCGCTTGCTCTCCA1082913
1082914GTCGCGTCCTGCACGGGCGCGTGGATTGAAACAGCTCAGTCGTTCCGATTTAGGTACGGTGTGGAG1082979
1082980GTCGCGTCCTGCACGGGCGCGTGGATTGAAACAATACCTACGATAAAAAGAAACAAAAAGTCACTAA1083046
1083047GTCGCGTCCTGCACGGGCCCGTGGATTGAAAC1083078
Left flanking sequence : Till position 1081540 (length bp)
TCAGCTGCTTAGATTTGATCTGGATTGGCTTGCTTGTTGTAGCGAGGTTAGCGCAAAACCTGCAATTTTG
CTAAGCTGGCTGTGCCTTATAGCTAAGGCT
Right flanking sequence : From position 1083078 (length bp)
ATATAGTTGAAAGAGAGCGGGGGATTTATTCACAAAGCCAGGCCTTTCGGTGAGCCTCGACCTTAGCTCA
GCAAGTTACGAAGCGATGTTTCGACCTTGC
Print the CRISPR sequence : From position bp To position bp