Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013679_2                                                                                                                 top


Strain : Xanthomonas oryzae pv. oryzae GCF_001746735 RefSeq :NZ_CP013679 (chromosome circular)
CRISPR id : NZ_CP013679_2
DR consensus (23 bp) : CGGCGGTCGTCACGGCGGTCGTCNumber of repetitions :4
Begin Position : 4130342 End Position : 4130514

4130342TTGCGGTCGTAACGACGGTCCTGGTAACGGGCGTCGCGATAACCATCACGGTAGCCG4130398
4130399TTGCTGTAGTAACGGCGGTCCTGACGCCACTCGCGGCGGTCGTCA4130443
4130444CGGCGGTCGTCACGGCGGTCGTCACGGCGGTCGTCACGGCGGTCGTCA4130491
4130492CGGCGGTCGTCACGGCGATCGTC4130514
Left flanking sequence : Till position 4130342 (length bp)
CACATAGACCGGCCCGTGATAACGCTGGCCACGGGCCCAATACGGACGCGGCGGCGGGCCGGGGCGGTAG
TACCCAGGGAGGTCATAGACATAGACCCGA
Right flanking sequence : From position 4130514 (length bp)
GCGCCAGTCACGGCGATGATCCGGGCCATAGCCGCGGTCATGGCCGCGGCGATCGTGGTCGCGATCCCAA
TCCCCGGCGAATGCAGCCGGTGCGAAGGCA
Print the CRISPR sequence : From position bp To position bp