Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014159_1                                                                                                                 top


Strain : Aerococcus christensenii GCF_001543105 RefSeq :NZ_CP014159 (chromosome circular)
CRISPR id : NZ_CP014159_1
DR consensus (28 bp) : CTTTTTCCCGCGTATGCGGGGGTGATCCNumber of repetitions :16
Begin Position : 1317504 End Position : 1318449

1317504CTTTTTCCCGCGTATGCGGGGGTGATCCTAAGGAGGGCGCTTATTTCATCAAAGCTTGTGT1317564
1317565CTTTTTCCCGCGTATGCGGGGGTGATCCTAAGCCTCACCGTCAACGACAAAAACCCCAATTT1317626
1317627CTTTTTCCCGCGTATGCGGGGGTGATCCTGGGTAGCCAACCAAGTATACAAGCGTGGGGAT1317687
1317688CTTTTTCCCGCGTATGCGGGGGTGATCCTAAGCCGAATAACCATGTATTTGACCGCCACTG1317748
1317749CTTTTTCCCGCGTATGCGGGGGTGATCCCAGCAACACCAGATCGGACAGCCACTTATTATG1317809
1317810CTTTTTCCCGCGTATGCGGGGGTGATCCTATTTATTCTCTTCCATAAATTTTGAAATATCT1317870
1317871CTTTTTCCCGCGTATGCGGGGGTGATCCTTGGTTATTAGAGAAAGCAGATTCCCCGATACT1317931
1317932CTTTTTCCCGCGTATGCGGGGGTGATCCTATTTTTCTATTTAGTCTTAGTCGATCAGTTGC1317992
1317993CTTTTTCCCGCGTATGCGGGGGTGATCCCAGATCATACTTTTATGGTGATGAAGCGATTTG1318053
1318054CTTTTTCCCGCGTATGCGGGGGTGATCCTGCGATGTCTCAAGTGGCAAATGATGTTTCAAG1318114
1318115CTTTTTCCCGCGTATGCGGGGGTGATCCTGGTAGCAAGCGGTTTTTTCAAAGCGAAGATTT1318175
1318176CTTTTTCCCGCGTATGCGGGGGTGATCCTGCCGCTGAAAGTGCTGGTAGTCGGATAAGTGG1318236
1318237CTTTTTCCCGCGTATGCGGGGGTGATCCCAACATCTCTCCTTACATGCTGGCTGGCATATCC1318298
1318299CTTTTTCCCGCGTATGCGGGGGTGATCCTGGCTAAGAATAATCAAAACAAACAAATGACCG1318359
1318360CTTTTTCCCGCGTATGCGGGGGTGATCCTTTAAAAGGTGCCAATTTAGAAGATGCCGATTTA1318421
1318422CTTTTTCCCGCATATGCGGGGGTAATTT1318449
Left flanking sequence : Till position 1317504 (length bp)
CGTTGAAAGATGCAGAACTCATTGATAAACTCATAAATGAAGTGAATAAACTTCGGGATCTATTTGGAAA
TCAAGGTTGATATTATAGGGATTTTTTAGT
Right flanking sequence : From position 1318449 (length bp)
ATACTAAGCATGTTATGGGATAGCAACACTTACTGTTTCTCCTTTCTTGAGATTAAATCTGGAATAATTT
ATAAACTGAAGATAGTGGAATAAGTTTGGC
Print the CRISPR sequence : From position bp To position bp