Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014241_1                                                                                                                 top


Strain : Bifidobacterium angulatum GCF_000966445 RefSeq :NZ_CP014241 (chromosome circular)
CRISPR id : NZ_CP014241_1
DR consensus (36 bp) : GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACNumber of repetitions :16
Begin Position : 48 End Position : 1074

48GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACGGTTTGGGGCATCCGGTGCGCCTGAGCTGT113
114GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTGCGTTGCCTTACTCCCGACGCTTGCAGCT179
180GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTACGATGCGCCAAGCTGAATGGTCAGCAGG245
246GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTTGTTCCGTATCCCTGTTTTTAGGAGGATA311
312GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTAGAGATTGAGGGCGTAATTGTCGGTTTTG377
378GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACGGCACGCCGCAGCCAGGGACGCCACGGCCA443
444GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTATAAACGTATACACATGCCCCCTAACCAC509
510GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTTCGTTACCGGTTTCCTCGATGGGCTTACG575
576GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACACTTCGAGCATTGGCTGGACACCGTGGCGT641
642GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTTGGCATCCACGCCGGAACCAGTGAAGGAG707
708GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTACGGCCTACTCGGGTGAGTGATGGCCGAC773
774GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACGATGAATGTGCCCGCCTTGATTAGTCCAAA839
840GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACAAACCAAACAAACAGACTGAATGAATCAGA905
906GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACTTGTCTCACGTGGTAATGCCTGTACGCCGTG972
973GTGGTCTAGGTCATTGATCTGACAGACATCTGAAACCTACGATTCGCATTCCGTACGTGTATAGGA1038
1039GTGGTCTAGGTCATTGATCTGACAGACATCTGAAAC1074
Left flanking sequence : Till position 48 (length bp)
TGACAGACATCTGAAACACAATCTCCGTTTCCTCAGTAATGAGGTCA
Right flanking sequence : From position 1074 (length bp)
CGATAGTCTTGGAGATTGCTGAACAGTTCATGAAAATTGAACATAATCTCCGTCAACATAATAGCTTCTT
CCCCCTGTCAGGGTGATCTTCTCGTTGCAG
Print the CRISPR sequence : From position bp To position bp