Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014360_5                                                                                                                 top


Strain : Methylomonas sp. DH-1 GCF_001644685 RefSeq :NZ_CP014360 (chromosome circular)
CRISPR id : NZ_CP014360_5
DR consensus (36 bp) : GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATNumber of repetitions :15
Begin Position : 3608345 End Position : 3609348

3608345TATAAAATCCCTTCGTAAACAGGGCTGTTATTTAATAACAATCAAAGCTATCCGAGGTAACTCAATTCG3608413
3608414GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATTAAACACGCCGAAATAATGCGGCAAATGGCCGA3608482
3608483GTCTTAATCCCTTCATGAACAGGGCTGTTATTCAATCTTTCAAATCTGCTGAAAGAGGTACAGGGTACAC3608552
3608553GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATCCTAGAAACTAAGGAAGTAGATGGCGTAATTG3608620
3608621GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATACACGGTGTGATGTGGTCCAAGCCTTTTATAAAG3608690
3608691GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATTCATTATGCTACAGAGACGACTACGGCGTGTTAG3608760
3608761GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATCGATACTAAAGACTGACCTTTACGGATATCTAT3608829
3608830GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATCTATGATGACGGTAGTTTTGTCGTTCCAGAAGT3608898
3608899GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATTTCAGGCACCACCCTGGTTGTACAGATATGAA3608966
3608967GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATGGAAGCTGCTCCGGCGGTTATCCATAAGTGGGAT3609036
3609037GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATAAAGAATCCATTTGGATACCTCAAGATTTATT3609104
3609105GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATCTGGAAAGAATCATTTTGCATCGCAGCCGGAAG3609173
3609174GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATCTACTGTTGGTATCGCTACCCCAGTTACTTATT3609242
3609243GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAATAAAAAAATACTTTACTTTTTTCTGATATGCGTTA3609312
3609313GTCTTAATCCCTTCGTGAACAGGGCTGTTATTCAAT3609348
Left flanking sequence : Till position 3608345 (length bp)
GGGAGTAAACCTTCTCACGAGACACCTTAAAAATCGGCTCGACTGCGGAATTTTATATTGATGTATTGAA
TTGGTACCGCAAAGGACGACAAACAAACTA
Right flanking sequence : From position 3609348 (length bp)
GGCTTGCAGCCAAAAAATAGCTTGGAATCAGCGGGTTATACAGACAGTTCCCAAGCGGTGTCACACTCAT
GATTGAAATTTACCGTTCATCCAATCTTGA
Print the CRISPR sequence : From position bp To position bp