Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014504_2                                                                                                                 top


Strain : Pedobacter cryoconitis GCF_001590605 RefSeq :NZ_CP014504 (chromosome circular)
CRISPR id : NZ_CP014504_2
DR consensus (46 bp) : GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACNumber of repetitions :65
Begin Position : 1406170 End Position : 1411070

1406170GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCGCTTGCTTGCTTGCCTTTATCACCGTTTA1406245
1406246GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACATGAATTTACAGAATACCTGAAAGATCAAA1406321
1406322GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCGGCCAGTTCTTTAGCGAAGATGGCAGGTT1406397
1406398GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTTCCAAATTATCTTTCGTTAATTCCTGAGC1406473
1406474GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCAGTTGCCCCTTTTCTACCCAAATTTGTTT1406549
1406550GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAATACATTCGCCTTTACAACCGACGAATCA1406625
1406626GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGGGCAACTGCAACGGAGGATAAGGAAAATT1406701
1406702GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTTCTTTTTTATATTTATTTATTTTACTGT1406776
1406777GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAAGGTTTACGTCCCATTTATTCCCTTGTGA1406852
1406853GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGCCAAAACGCATGAACAGCTAAAGGCGACT1406928
1406929GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTATTTTCTTATCGAACGGTATTTGAGTGCC1407004
1407005GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGAAGACGGCGAAGGTGACGCAGCGGTGGAA1407080
1407081GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCAGTGCGTGCTGATTATACTCAACGTAGGC1407156
1407157GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAGTCCTGATCTCGTGAGTAGGGCCTTCTTT1407232
1407233GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGGAATTGAACTGCTTGGATTTATTTGTAG1407307
1407308GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCAACACCCTGTAACCATCACTTACATTCCA1407383
1407384GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTAAGTTGGAAAAGGTTAAAGAAAACCTCCG1407459
1407460GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCATTTTGGAAACTTAGGAAACTATTTTAT1407534
1407535GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACACATAACTTTGAACAGTATTTGTATCCTTG1407610
1407611GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGATGCAGGTGCTATCCTTTACGATGATAT1407685
1407686GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTAATTGCCTCTTAATGTGCCTTCGATTCT1407760
1407761GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCCCAACCGTGATATTTATCTATTTGCTTTG1407836
1407837GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTTGTGCTCTAAAAAACGGTGCCGAAATCAA1407912
1407913GTTGTTGCAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGTAGCACTACGAGTACTTTCCGGCAAACC1407987
1407988GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTGACAGACCAAGTGTCGTTGGTTGCGCTTC1408063
1408064GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTTTATCTCTTTTATCGATCAGGACCATTGT1408139
1408140GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCCGCCAAACAGTTTTTACGATACTTAGAAA1408215
1408216GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTATACCATTAAACTTGCATTTGTGTGTTGT1408291
1408292GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTCATTCGAGTTTTGGAACTGGTTGAAATA1408366
1408367GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACATATCATTGCCTTTGCAGCTACGCTAACAT1408442
1408443GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACACGAAAAGTCAAATTGATAGTATTAGTAAA1408518
1408519GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTGCAGGATAGTCGCGCATTGCTTTTTCTAA1408594
1408595GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCACGGATTGAAGGTTATTACCATATCTGGG1408670
1408671GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACATGTTCTGATGAAAATGAAAGGTCATCATG1408746
1408747GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCGCGCCCGCAATTCTTTTTTCATGACAACG1408822
1408823GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAAAGAATCAGCGAATTGCTTAATACTAGGA1408898
1408899GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACACGTAATAGTCGATAAACTTACGCTCCGTA1408974
1408975GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTAAAAATGAATCTAGATTATTGGTCATTTT1409050
1409051GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTAAGATTAGTACTCTCAGAATCTGACATTG1409126
1409127GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAAACTTCTTCCTAAGAAAAATAATTCAATA1409202
1409203GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACACGTGACATGAAGGCCATTCCGGATGAATA1409278
1409279GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCCAAGAGCAGCAACAGCTAAAATAATCGCA1409354
1409355GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACATTGCGCCTGCAGTTCTCTTATACGTTTAT1409430
1409431GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCATGGTATTGAAAGAATGATCTCCTTTAAC1409506
1409507GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCTTTCAGCCCCCATTTGACACCTCCTTTAC1409582
1409583GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGTTTTTTATGGTACTATCAGGGAACTTAAT1409658
1409659GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTTGTCAAGAAACCTCTGTTTTACTGCATTT1409734
1409735GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAACGCCATCCACATACATTTTGAATCCTAT1409810
1409811GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCAAAGCGGTTACAGCCTCTCAATGGCTTT1409885
1409886GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTGGTGGAATTGAAGGCTCTGCGCTTTCCCT1409961
1409962GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTTACAGTTAAAGACGGAGTTATCGCAAGCG1410037
1410038GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTAGTGGGTTTAGTGGCAATGTTTATTGCG1410112
1410113GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGCATTAACAAATTATTTTAAATTATCCACA1410188
1410189GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTAATGGGACCGCAACTATCAGAGCGTCACA1410264
1410265GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCTCTTAATACTCGTTTACTTTATCTCTAAT1410340
1410341GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACATTGCGCCTGCAGTTCTCTTATACGTTTAT1410416
1410417GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCGTTGAACCAGTTCATAAAATAATTATAAA1410492
1410493GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACCAACTGTCCCTTTTCTACCCATATTTGTTT1410568
1410569GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACAGCATATCCTTAATGAATTGCGAACAATAT1410644
1410645GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACATGTAAACCGATAAGGCCTGGAATTTTAAG1410720
1410721GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGATAACGGGATAACACGGTATCTGCTTTTA1410796
1410797GTTGTTGTAAATATCAGTAGTTTAAAGGATGAAAGCAAATCACAACTCGGTGGTGGCCATTGTTGAAAACTTGCAG1410872
1410873GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACGGATCGAGTTGCAAGAAGGAAGATCAGCCG1410948
1410949GTTGTTGTAAATATCAGTAGTTCAAAGGATGAAAGCAAATCACAACTCCTGCCGGAAAAGCCCAATTGCCCACTTG1411024
1411025GTTGTTGCAAATATCAGTAGTTCGAAGAATGAAAGCAAATCACAAC1411070
Left flanking sequence : Till position 1406170 (length bp)
AAACACATAGAATAAAAATCCGGAAGCTTTTTTGTCCGGATTTTTTTAATTCTATTTATTAATGTAACTA
TCTGATATATAAACGTTTGTTGTAGTTCGT
Right flanking sequence : From position 1411070 (length bp)
TTTCAGTGATCGTGGTGTCATCGCAAAAGTGTTGTTGTAAATATCAGTAAGAGTATTTACCGGATGGCTT
ATTGGGTGAGAAATGGTAGAAGGTTGTGGT
Print the CRISPR sequence : From position bp To position bp