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CRISPRs details
NZ_CP014673_6
Flanking alignement tool
Page manual
  
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NZ_CP014673_6                                                                                                                 
top
Strain :
[Clostridium] stercorarium subsp. leptospartum DSM 9219 GCF_001697285
RefSeq :
NZ_CP014673 (chromosome circular)
CRISPR id :
NZ_CP014673_6
DR consensus (30 bp) :
ATTTACATTCCAATATGGTTAGATTCAAAG
Number of repetitions :
136
Begin Position :
1831156
End Position :
1840030
1831156
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTCCGGTAAGGAGCGATTTTTACAATTCTTTAAT
1831220
1831221
ATTTACATTCCAATATGGTTAGATTCAAAG
GCCGAAGGCTGCCGAAATGTCGCACCATGGAAAAG
1831285
1831286
ATTTACATTCCAATATGGTTAGATTCAAAG
CTAAGTTCAAATTCTCTTTTATCTCCGTTAAACTC
1831350
1831351
ATTTACATTCCAATATGGTTAGATTCAAAG
CTTGATCAAGGTAATAAATTTCATCGGTTGTTAG
1831414
1831415
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTGTTGATAATGTGCTATTATAGATGTGAAAATGA
1831480
1831481
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTTATGAGGACGGTAAATGCTAATGTGGGGCGTTA
1831546
1831547
ATTTACATTCCAATATGGTTAGATTCAAAG
CAATTATTTGCGACTTATACAATGTTAAAGAATTT
1831611
1831612
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAGAGGATTAGGGAATCTATAGCATATTTGGTTA
1831676
1831677
ATTTACATTCCAATATGGTTAGATTCAAAG
TTATTTTCTATAAAATCGCTAATAATATCAGAATT
1831741
1831742
ATTTACATTCCAATATGGTTAGATTCAAAG
TATAAACCGCTTTTTCATACGCTCATTGAGAAGAAA
1831807
1831808
ATTTACATTCCAATATGGTTAGATTCAAAG
TAATTGGTGTTTATTATGAAAAATAAGATTTTAAAA
1831873
1831874
ATTTACATTCCAATATGGTTAGATTCAAAG
ATAAAAATGATTATTTCAAAATTTCCGTTAACTTA
1831938
1831939
ATTTACATTCCAATATGGTTAGATTCAAAG
GCAGGTTGAGCGGAGCGGGAGAAAATCTCCCGGTCT
1832004
1832005
ATTTACATTCCAATATGGTTAGATTCAAAG
ATTAAAGATAGCGGTGCACGTAGAGAATTTCCTAC
1832069
1832070
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAGTTGTCTCATTGTCTTTCTTCTGGTTTCTCTTT
1832135
1832136
ATTTACATTCCAATATGGTTAGATTCAAAG
CTAGTACAGTATACCCTATGCTTCCTATCTAGTAT
1832200
1832201
ATTTACATTCCAATATGGTTAGATTCAAAG
GATAAAGTCATTTATTTCTTTGAGAAGAGCATTAT
1832265
1832266
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTGCTGGAGTACAAAGGAGGCGATATACGATGC
1832329
1832330
ATTTACATTCCAATATGGTTAGATTCAAAG
TCTGTCACTCAGAAAAAAACTAAAATCAAATTTTT
1832394
1832395
ATTTACATTCCAATATGGTTAGATTCAAAG
CATTTCCCTCACCATCCGGTATAGACGGAGAACTT
1832459
1832460
ATTTACATTCCAATATGGTTAGATTCAAAG
AACTTGATAAATTAAGTGCTACGTGGGAAGAATTT
1832524
1832525
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAATTTCCTTTTTGAAAGTTGTCAGCTCAATTTCAA
1832591
1832592
ATTTACATTCCAATATGGTTAGATTCAAAG
CGCCGAGTTTCGCCACGAGTGCCTCATATTCGGCAT
1832657
1832658
ATTTACATTCCAATATGGTTAGATTCAAAG
GTGATGGTGTATCATGGCACATGCACGGTTTTCTCAT
1832724
1832725
ATTTACATTCCAATATGGTTAGATTCAAAG
GATGGATAGTTTAATGAGTTTAATTGAGAGGTTTGT
1832790
1832791
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTGTCTTTTGGTATTTTTATGGTGGGTGCTGTGAT
1832856
1832857
ATTTACATTCCAATATGGTTAGATTCAAAG
CCTATACCGGGTGTAAGTTATGGTGCATTATATTT
1832921
1832922
ATTTACATTCCAATATGGTTAGATTCAAAG
ATAATTAATCCAAATAAATTCCTTCCCTTTATTTC
1832986
1832987
ATTTACATTCCAATATGGTTAGATTCAAAG
GCATTTTATGCTCGTAGGGTGCATCGGCGGCACAGG
1833052
1833053
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTGTCGAGCTCTTCTTTCAAAAGCATACACAAGTTT
1833119
1833120
ATTTACATTCCAATATGGTTAGATTCAAAG
CCTCAATACTGCATGCGTATAAGCGCTTAGCTGTTCAT
1833187
1833188
ATTTACATTCCAATATGGTTAGATTCAAAG
ATTTCTTGTAATCATAGATATTCCCGCTTGTTGATG
1833253
1833254
ATTTACATTCCAATATGGTTAGATTCAAAG
TTAGTCTAGTATTTCTTATTTCTCTATATTTAAT
1833317
1833318
ATTTACATTCCAATATGGTTAGATTCAAAG
ATTACGATGTAGTAGAAACTGGCAAATATACAAGAGT
1833384
1833385
ATTTACATTCCAATATGGTTAGATTCAAAG
CTTTAATAACGTCAAGTGCAATTTTTAATACATT
1833448
1833449
ATTTACATTCCAATATGGTTAGATTCAAAG
CTTCAAAAGTTTTATATTCTGTTGATTCTCTGATAA
1833514
1833515
ATTTACATTCCAATATGGTTAGATTCAAAG
CCACCATTAATTTCAAAAGGTCAATATATTCTTC
1833578
1833579
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTCCGTCTCAAAAATGTATTCCCCTATCGTGATGAA
1833645
1833646
ATTTACATTCCAATATGGTTAGATTCAAAG
GCAAGCTGGACAGGGCAGGCTTTCGTTGATTCAA
1833709
1833710
ATTTACATTCCAATATGGTTAGATTCAAAG
GTCATAAAATGTTAAATTACAAATAAAAAATGATACA
1833776
1833777
ATTTACATTCCAATATGGTTAGATTCAAAG
ATATGGTGCGTTTGCTCTTGCTTGTCTCAGAACGA
1833841
1833842
ATTTACATTCCAATATGGTTAGATTCAAAG
GGATAAATCCGCATAAATAAAGAGCCCTTTTTCGT
1833906
1833907
ATTTACATTCCAATATGGTTAGATTCAAAG
TATATAATATCAATTATGTAATGAATACTATCAAGC
1833972
1833973
ATTTACATTCCAATATGGTTAGATTCAAAG
GGATGGACTAATTATGAAACATGGATAACTAAATTA
1834038
1834039
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAGATGTTTTCTCCCTACCCCTACATCATCAGGTCG
1834105
1834106
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTGTGGCAGGGATGCGTCCGGCGTGTGAATTTGAA
1834171
1834172
ATTTACATTCCAATATGGTTAGATTCAAAG
ATTGATTACAGCGCTACCCCAGAGGGCGTGGAAG
1834235
1834236
ATTTACATTCCAATATGGTTAGATTCAAAG
CTATACCTGTATAATCTACTGTTTCCTTGCATAT
1834299
1834300
ATTTACATTCCAATATGGTTAGATTCAAAG
ATAGGGTTTTGAAAGGGTTTCGGAAGGGTTTGAAA
1834364
1834365
ATTTACATTCCAATATGGTTAGATTCAAAG
TAAGAACCTACAATGAATACGACGAGGCCAGCGAA
1834429
1834430
ATTTACATTCCAATATGGTTAGATTCAAAG
CTATTGCCATCGCTCAGGTGCAACAACCAAATCTCC
1834495
1834496
ATTTACATTCCAATATGGTTAGATTCAAAG
TTGGAGGCAAAGGGGATATAGCATTTACAGAAGCAA
1834561
1834562
ATTTACATTCCAATATGGTTAGATTCAAAG
GCCCTGGCCGCCGCCGACAGAAGCAGAGCGGCT
1834624
1834625
ATTTACATTCCAATATGGTTAGATTCAAAG
GATGCGGACGCGCAACACATAGACATCCTTGTCGTTC
1834691
1834692
ATTTACATTCCAATATGGTTAGATTCAAAG
CCGCTAACGCTAATGAATATCCTAGTTTCGTAGTTC
1834757
1834758
ATTTACATTCCAATATGGTTAGATTCAAAG
TAAAATCTTTTGAGTGCCATATCTTAACGAAAACCT
1834823
1834824
ATTTACATTCCAATATGGTTAGATTCAAAG
TGACTCGCTTTGCACGGCACCGGGTGTGATCAGAT
1834888
1834889
ATTTACATTCCAATATGGTTAGATTCAAAG
CCTGATTCTAAAAATCCTATTATTAAGCGCATCAAA
1834954
1834955
ATTTACATTCCAATATGGTTAGATTCAAAG
TGTTGCTTTCAGACTGTCTGCCTGTCTGCTGTAT
1835018
1835019
ATTTACATTCCAATATGGTTAGATTCAAAG
CGCTATTGCAAGTATATCAACCAATACCGCACCTAT
1835084
1835085
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTAACACATCGGCATCACCTCACTTTGCCTTCTCA
1835150
1835151
ATTTACATTCCAATATGGTTAGATTCAAAG
TACGGTACCGCTGCGGCGTAAAGTCCCGGTATAAAT
1835216
1835217
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTGCTGGCCTTCGATTATGGCTCGGCCGTCATAG
1835281
1835282
ATTTACATTCCAATATGGTTAGATTCAAAG
GACGTTCACCCGCAACAGCGTAGCCTACCTCTCAGA
1835347
1835348
ATTTACATTCCAATATGGTTAGATTCAAAG
CCAATCACGAGGAACAGTCAAATACGTGCTATGG
1835411
1835412
ATTTACATTCCAATATGGTTAGATTCAAAG
CAGTACAGCGAATTCCTTACCGTTTCCTATGAACAT
1835477
1835478
ATTTACATTCCAATATGGTTAGATTCAAAG
GGCAAGAGCGCCACACGGTTAGCATTTTTTAGTCCGC
1835544
1835545
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAGATATCATGTCAGCAGTAGAACTTGCAAAAACTT
1835611
1835612
ATTTACATTCCAATATGGTTAGATTCAAAG
TGCCCAACATGGTTGTAAAACCAATCTGTGCAGTT
1835676
1835677
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTTTACAACCATGTTGGGCAGCGCTGAGAAAGCTC
1835742
1835743
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTTTTAGCTTTAGCTGTAGTTAATGCTCTTTCTA
1835807
1835808
ATTTACATTCCAATATGGTTAGATTCAAAG
TCCGCCCCGTCAGAAAGTCACTTTCTTCAGCACGG
1835872
1835873
ATTTACATTCCAATATGGTTAGATTCAAAG
TCTGGTCAAAAAGCCGCTCAATTTTTCTCATCCGC
1835937
1835938
ATTTACATTCCAATATGGTTAGATTCAAAG
TTATAAAAAGAAATGTAATGTGGGATTTTGAGAACGAT
1836005
1836006
ATTTACATTCCAATATGGTTAGATTCAAAG
GTATGAAGGCCGTCATCACGACCACTGAATGGTAG
1836070
1836071
ATTTACATTCCAATATGGTTAGATTCAAAG
TGTTGCGTTGGGGATGTTTACTCCAACCTCTACAA
1836135
1836136
ATTTACATTCCAATATGGTTAGATTCAAAG
GTAGAATCGATAAAATAAATGCTACTAAATTTAAAG
1836201
1836202
ATTTACATTCCAATATGGTTAGATTCAAAG
AAACAAGGTTTTGAGAAGAAAAAGGATGCTGAAAAA
1836267
1836268
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTCTTCATGTTATGAACACACCCCCCAGAAGCCA
1836332
1836333
ATTTACATTCCAATATGGTTAGATTCAAAG
TGTTCTTTGACGCTCTGGGCGGCCAGGATGTTCTTC
1836398
1836399
ATTTACATTCCAATATGGTTAGATTCAAAG
CTGTGCCAGTTCAATACCATTTCAAGTGTCGCTTGC
1836464
1836465
ATTTACATTCCAATATGGTTAGATTCAAAG
AATTTCGTCTGCAAAACCCTTTTCCTTGCACTCTT
1836529
1836530
ATTTACATTCCAATATGGTTAGATTCAAAG
AGACCAATGATACCATATCATCCCCACAAACTTAA
1836594
1836595
ATTTACATTCCAATATGGTTAGATTCAAAG
TTCTTCCTCGGGCTCTTCTGTTGCTTCCTCGATAGT
1836660
1836661
ATTTACATTCCAATATGGTTAGATTCAAAG
AGGGCAGAAATTAATTTTATGATTGTCGCAAAAGC
1836725
1836726
ATTTACATTCCAATATGGTTAGATTCAAAG
CTTCATACCGTGTTTTAGGGTCAGCCCTTAGAA
1836788
1836789
ATTTACATTCCAATATGGTTAGATTCAAAG
AATTAGCGCTTTTTATTTTGGAAAGGAGTATTAATA
1836854
1836855
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTTCATACCGTGTTTTAGGGTCAGCCCTTAGAA
1836918
1836919
ATTTACATTCCAATATGGTTAGATTCAAAG
GTGAGGAAGCCGAAAGAAAAATGCTGAAAAAAGCA
1836983
1836984
ATTTACATTCCAATATGGTTAGATTCAAAG
ACAGCAAAGAAGAATTGAACGCGGCAGTTGAATTA
1837048
1837049
ATTTACATTCCAATATGGTTAGATTCAAAG
ATGCCGCTCACACGCCAGCCATTCAAATTCACACGC
1837114
1837115
ATTTACATTCCAATATGGTTAGATTCAAAG
ACTTGTCAAGCTATTATGACGCAGTTACAGAATAC
1837179
1837180
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAGAGTGGTCGGGAGCCCGGACCAGCTGAAGGAA
1837244
1837245
ATTTACATTCCAATATGGTTAGATTCAAAG
GAGGTCAACCTCTCCCTTATTTCTTCTTTTTGATTT
1837310
1837311
ATTTACATTCCAATATGGTTAGATTCAAAG
CTGCATTGAGGTCCTTATCAACCTTTGCAGTCAGT
1837375
1837376
ATTTACATTCCAATATGGTTAGATTCAAAG
GCAGTTTAATGCGCATAAGGCACAAACTGTACAAAA
1837441
1837442
ATTTACATTCCAATATGGTTAGATTCAAAG
TCAGCTTCCCCGGTACAGCAATTTCATTTGTACCG
1837506
1837507
ATTTACATTCCAATATGGTTAGATTCAAAG
GTACGCCGGATTGCCTACCAGGCAAGCCAAGTATA
1837571
1837572
ATTTACATTCCAATATGGTTAGATTCAAAG
GCATGTCCTCATATCGTTTCTGACTCGGGTCATAAGG
1837638
1837639
ATTTACATTCCAATATGGTTAGATTCAAAG
GTCATAATAGCTTGACAAGTAAACCTGACCTTTTCTGA
1837706
1837707
ATTTACATTCCAATATGGTTAGATTCAAAG
GTCTGTTTCTTGCTTCGATTAGCGTTTTTTCTGATG
1837772
1837773
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTTGTCGCGATACAGGACAACGCCCTTCTTCCTTG
1837838
1837839
ATTTACATTCCAATATGGTTAGATTCAAAG
TAAAAAAGAACAAAAATCCGACTGGAGATGGGTTGC
1837904
1837905
ATTTACATTCCAATATGGTTAGATTCAAAG
GATTGAGGGGGTCTGCCAAGAAATGTTTTCACCCT
1837969
1837970
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAAGTGATCTTTGCTGCCAGGGATCTTCCGAGGTTGT
1838037
1838038
ATTTACATTCCAATATGGTTAGATTCAAAG
TGTGAACAGTGCGGAAGCGAATTAAAACTATCCAT
1838102
1838103
ATTTACATTCCAATATGGTTAGATTCAAAG
TGAGAAGAAAAAGAATCTATCCGATTTGGTAAATGC
1838168
1838169
ATTTACATTCCAATATGGTTAGATTCAAAG
TTATTGAGTTTTGTGATAGAATTCAGAAAATGAAAA
1838234
1838235
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTTTGGATTCTGTTGCATAAAAAAAAAGAGCTTTA
1838300
1838301
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTTGACAGGCACCATGTTAAAAGAGGGCTGCCATCA
1838367
1838368
ATTTACATTCCAATATGGTTAGATTCAAAG
GATATGAAAGCGATTCTTGAATTGCCAAAGATGC
1838431
1838432
ATTTACATTCCAATATGGTTAGATTCAAAG
CTGAAGCCCATGCGCTCAATTTCGGAATTTATCTT
1838496
1838497
ATTTACATTCCAATATGGTTAGATTCAAAG
AACATTTTCTGTTTACCCTGCTCAAACATTTCTAC
1838561
1838562
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAAGGACTATCATGTTATTAGACAAGAGTTAGAT
1838626
1838627
ATTTACATTCCAATATGGTTAGATTCAAAG
GCCAATGAGGGCGGCGGCCTTCAGGGCTTCCTCT
1838690
1838691
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTGCAGATGCAGTGCGATGCGGGAAAATTACAG
1838754
1838755
ATTTACATTCCAATATGGTTAGATTCAAAG
TCACAGAGGAAAACCTGTCGGCCGAGAATAACAG
1838818
1838819
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTGCTGTGCCGGCAGAATTTTTCGATGAACTCAAT
1838884
1838885
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTTTGCTAATTTCAGTCAAATCATCATATTCAAA
1838949
1838950
ATTTACATTCCAATATGGTTAGATTCAAAG
TGCTCTAACAAATCGCCGCTTGCCAGTATCTTTA
1839013
1839014
ATTTACATTCCAATATGGTTAGATTCAAAG
AATGGTGAGTATTGAGGATATTGATAGTAAAGTTC
1839078
1839079
ATTTACATTCCAATATGGTTAGATTCAAAG
GTATATCTAATGAACGATAAATATACTCATAAAAA
1839143
1839144
ATTTACATTCCAATATGGTTAGATTCAAAG
CCATAGCACCTGGTGCTGCCAGTCAAGCAACAAAAA
1839209
1839210
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAATTGCAAAAACTTTGGACATGCCCCGCGAGCAA
1839275
1839276
ATTTACATTCCAATATGGTTAGATTCAAAG
ATATTGCGAAATATCCACCTGCTGCGCTTCATACA
1839340
1839341
ATTTACATTCCAATATGGTTAGATTCAAAG
CCAATTTTCCCATCTTTCTGGACTACAATCACTTGC
1839406
1839407
ATTTACATTCCAATATGGTTAGATTCAAAG
GCGCCACAATCACCTTTGCCTTGTCAAATGGTGCGG
1839472
1839473
ATTTACATTCCAATATGGTTAGATTCAAAG
CCACTCAGCAGAACGAAGCAGTGGACATGAGCGAT
1839537
1839538
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAGTAGTTCTGTAAAGCATGTATGCCTGAATTTGTG
1839604
1839605
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAATGTAATTCAATACCTATTCCCTTGTCGTCAA
1839669
1839670
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAATTCCCTTAAGCTGTTCAGCTCTTCTCTGTTACGC
1839737
1839738
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTTTCAGAAAAAGCAGGTATATACATCCAGGACGG
1839803
1839804
ATTTACATTCCAATATGGTTAGATTCAAAG
ATAATAAAAGCCTCGTTATTGAACAAGGCTTCTT
1839867
1839868
ATTTACATTCCAATATGGTTAGATTCAAAG
AATTCTTTACTGACCTTGTCGAGCTCAGCCTTTGTC
1839933
1839934
ATTTACATTCCAATATGGTTAGATTCAAAG
CAGCATGGTTAAAACTTCAGGAGACAACAAATAAAGA
1840000
1840001
ATTTACATTCCAATATGGTTAGATTCAAAG
1840030
Left flanking sequence : Till position 1831156 (length
bp)
CATATCGTGGTTACTTTTGTCAATTAGCCTCCACGAAATTTACACCACTACTTGAGACTATAACTTAAAA
AGGTAACAAAGAAGGAAATAGTTGAATTTT
Right flanking sequence : From position 1840030 (length
bp)
GCGATTAATTATAATACTTGAATTTCATATCTTTTAAGTACAGTTTCTGTCTATGATATAAGGTTAAAAA
AATATGTATTACATACAGCTATATAAATTT
Print the CRISPR sequence : From position
bp To position
bp