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CRISPRs details
NZ_CP014977_3
Flanking alignement tool
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NZ_CP014977_3                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1896 GCF_001623845
RefSeq :
NZ_CP014977 (chromosome circular)
CRISPR id :
NZ_CP014977_3
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
20
Begin Position :
1007045
End Position :
1008235
1007045
GTGTTCCCCGCGCCAGCGGGGATAAACCT
CCCACCGCGCTGATTAACGACGGACTGTTACA
1007105
1007106
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGAGCAACGACAGTAAATAATTTTTCGTGCTG
1007166
1007167
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
1007227
1007228
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAACCAGGCTGGATCGTAACTCCTATCCCCTC
1007288
1007289
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAAATGCAGGTGGGGTAACGAATGCGAGATTG
1007349
1007350
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCATTATTCAACCCTCCAGGCTCGCGCCGGCT
1007410
1007411
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC
1007472
1007473
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
1007533
1007534
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCACTACCGAGACCGAGACCGAGACCGAGA
1007594
1007595
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGCTGACGCACTGGATCAACCTGACGCAACG
1007655
1007656
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
1007716
1007717
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCGCGGAAAATTTCGCATTGACGATAAAGA
1007777
1007778
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTACGTGTTTATTCATCTGTTGCATTAGATTC
1007838
1007839
GTGTTCCCCGCGCCAGCGGGGATAAACCT
GAGGCGTACAGGCTGTTAGATGAGAAATTACC
1007899
1007900
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
1007960
1007961
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGGATTATCTGTATTTTACGGAAGTGGGCGCG
1008021
1008022
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATATTCGCCGCTTTCCATTTACCGAACGTAAC
1008082
1008083
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
1008143
1008144
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
1008205
1008206
GTGTTCCCCGCGCCAGCGGGGATAAACCG
1008234
Left flanking sequence : Till position 1007045 (length
bp)
ATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTATGTAGTAAAAAA
GGGCTTTTAGAACAAATATATAGTTTTAGT
Right flanking sequence : From position 1008235 (length
bp)
ATAAGGCGCGGTGCCACCCTCGGCTTTAATTGTGTTCCCCGCGCCGACGCGTTCCAGCGCACGTTACTCG
ATCGTGTTCCCCGCGCCAGCGGGGATAAAC
Print the CRISPR sequence : From position
bp To position
bp