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CRISPRs details
NZ_CP014983_3
Flanking alignement tool
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NZ_CP014983_3                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-2059 GCF_001623775
RefSeq :
NZ_CP014983 (chromosome circular)
CRISPR id :
NZ_CP014983_3
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
20
Begin Position :
1004830
End Position :
1006020
1004830
GTGTTCCCCGCGCCAGCGGGGATAAACCT
CCCACCGCGCTGATTAACGACGGACTGTTACA
1004890
1004891
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGAGCAACGACAGTAAATAATTTTTCGTGCTG
1004951
1004952
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
1005012
1005013
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAACCAGGCTGGATCGTAACTCCTATCCCCTC
1005073
1005074
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAAATGCAGGTGGGGTAACGAATGCGAGATTG
1005134
1005135
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCATTATTCAACCCTCCAGGCTCGCGCCGGCT
1005195
1005196
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC
1005257
1005258
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
1005318
1005319
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCACTACCGAGACCGAGACCGAGACCGAGA
1005379
1005380
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGCTGACGCACTGGATCAACCTGACGCAACG
1005440
1005441
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
1005501
1005502
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCGCGGAAAATTTCGCATTGACGATAAAGA
1005562
1005563
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTACGTGTTTATTCATCTGTTGCATTAGATTC
1005623
1005624
GTGTTCCCCGCGCCAGCGGGGATAAACCT
GAGGCGTACAGGCTGTTAGATGAGAAATTACC
1005684
1005685
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
1005745
1005746
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGGATTATCTGTATTTTACGGAAGTGGGCGCG
1005806
1005807
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATATTCGCCGCTTTCCATTTACCGAACGTAAC
1005867
1005868
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
1005928
1005929
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
1005990
1005991
GTGTTCCCCGCGCCAGCGGGGATAAACCG
1006019
Left flanking sequence : Till position 1004830 (length
bp)
ATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTATGTAGTAAAAAA
GGGCTTTTAGAACAAATATATAGTTTTAGT
Right flanking sequence : From position 1006020 (length
bp)
ATAAGGCGCGGTGCCACCCTCGGCTTTAATTGTGTTCCCCGCGCCGACGCGTTCCAGCGCACGTTACTCG
ATCGTGTTCCCCGCGCCAGCGGGGATAAAC
Print the CRISPR sequence : From position
bp To position
bp