Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015111_3                                                                                                                 top


Strain : Acinetobacter sp. TGL-Y2 GCF_001612555 RefSeq :NZ_CP015111 (plasmid unnamed1 cir)
CRISPR id : NZ_CP015111_3
DR consensus (25 bp) : TTTTTTAGTTTTGATGTGTGAAATGNumber of repetitions :12
Begin Position : 113200 End Position : 113686

113200TTTTTTAGTTTTGATGTGTGAAATGCCCCCCTAAAAGCTCGT113241
113242TTTTTTAGTTTTGATGTGTGAAATGACCCTCCAGAAGCTCAG113283
113284TTTTTTAGTTTTGATGTGTGAAATGATTTTATAAAAGCTCAG113325
113326TTTTTTAGTTTTGATGTGTGAAATGCCCCCCTAAAAGCTCGT113367
113368TTTTTTAGTTTTGATGTGTGAAATGACCGTCTGGAAGTTGAG113409
113410TTTTTTAGTTTTGATGTGTGAAATGACCGTCTGGAAGTTGAG113451
113452TTTTTTAGTTTTGATGTGTGAAATGACCCTCCAGAAGCTCAG113493
113494TTTTTTAGTTTTGATGTGTGAAATGATCCTCTTGAAGCTCAG113535
113536TTTTTTAGTTTTGATGTGTGAAATGTCCCCCTAAAAGCTCGT113577
113578TTTTTTAGTTTTGATGTGTGAAATGACCGTCTGGAAGTTGAG113619
113620TTTTTTAGTTTTGATGTGTGAAGCGCCTTTCAATCAACTAT113660
113661ATATATAGTTTTCATGTGTGAAATG113685
Left flanking sequence : Till position 113200 (length bp)
TATTGAGTTTTCTATTAGATTTAATGCAGAAATCAACTCATCATTAAAAATAAATAATATAATCAATGAC
TTATAATTAAGATATTCATCACAAAAGTTT
Right flanking sequence : From position 113686 (length bp)
TGCCTATATAACCAAATCTTGTGATTTTGATCACCCAATATAATTATAATTTATATAAAATATACTTTTT
AAGCTGAAAATCGCTTTTAAATACTCTGAA
Print the CRISPR sequence : From position bp To position bp