Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015412_3                                                                                                                 top


Strain : Pseudoalteromonas luteoviolacea GCF_001750165 RefSeq :NZ_CP015412 (chromosome circular)
CRISPR id : NZ_CP015412_3
DR consensus (28 bp) : CTTTACTGCCGTACAGGCAGCTTAGAAANumber of repetitions :12
Begin Position : 740720 End Position : 741409

740720CTTTACTGCCGTACAGGCAGCTTAGAAAGTAGTAATCCCACCTGCACCTTTAACATCAAG740779
740780CTTTACTGCCGTACAGGCAGCTTAGAAAAGGATATATCAGCAGATTTGCGTGACGCGAAC740839
740840CTTTACTGCCGTACAGGCAGCTTAGAAAAGTAGAGAAACAGACCCATGCTGTGCGATTCT740899
740900CTTTACTGCCGTACAGGCAGCTTAGAAATAATTGTTGTGTTTGTGCCGTACCAAATTCGA740959
740960CTTTACTGCCGTACAGGCAGCTTAGAAAAGACAGCTCAATTCAAAAGTGGAAGACTTTGG741019
741020CTTTACTGCCGTACAGGCAGCTTAGAAATCCGCTAAATGGACAGTAAGTTCCTTTTGATAT741080
741081CTTTACTGCCGTACAGGCAGCTTAGAAAGGTTAAATGGTTTTCAAGTAAGATGGAGGGCG741140
741141CTTTACTGCCGTACAGGCAGCTTAGAAAATAAGGGAAATTGACCAGATAATCATACAGAC741200
741201CTTTACTGCCGTACAGGCAGCTTAGAAATGTTGTATCAGCAACGAATGAAATGCTTGATA741260
741261CTTTACTGCCGTACAGGCAGCTTAGAAATTTATTCTCTCAAGCACAAAAACCTATGTTGT741320
741321CTTTACTGCCGTACAGGCAGCTTAGAAAACATGACAAATTCACTGGTTTTATTCCAATAG741380
741381CTTTACTGCCGTACAGGCAGCTTAGAAA741408
Left flanking sequence : Till position 740720 (length bp)
TAAAATACAGTAGGTTGTGATTAGCTGTTTTTCATAAGGTAAAAATAGGTTTTCTGCCTTAATAGCTTGT
TGCAACTTATCTTTTTTGATTTACTCTATA
Right flanking sequence : From position 741409 (length bp)
TTAACAGTCCATGGTCGTTAGCGGCTTTCAACTCCGTGTTGGAAATATTCCGGTTCACTGCCCTAAGGCA
GTTTAATGCATCCGTGATAAAGTGTTGGTC
Print the CRISPR sequence : From position bp To position bp