Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015414_3                                                                                                                 top


Strain : Pseudoalteromonas luteoviolacea GCF_001750405 RefSeq :NZ_CP015414 (chromosome linear)
CRISPR id : NZ_CP015414_3
DR consensus (28 bp) : TTTCTAAGCTGCCTGTACGGCAGTAAAGNumber of repetitions :12
Begin Position : 1096619 End Position : 1097308

1096619TTTCTAAGCTGCCTGTACGGCAGTAAAGCTATTGGAATAAAACCAGTGAATTTGTCATGT1096678
1096679TTTCTAAGCTGCCTGTACGGCAGTAAAGACAACATAGGTTTTTGTGCTTGAGAGAATAAA1096738
1096739TTTCTAAGCTGCCTGTACGGCAGTAAAGTATCAAGCATTTCATTCGTTGCTGATACAACA1096798
1096799TTTCTAAGCTGCCTGTACGGCAGTAAAGGTCTGTATGATTATCTGGTCAATTTCCCTTAT1096858
1096859TTTCTAAGCTGCCTGTACGGCAGTAAAGCGCCCTCCATCTTACTTGAAAACCATTTAACC1096918
1096919TTTCTAAGCTGCCTGTACGGCAGTAAAGATATCAAAAGGAACTTACTGTCCATTTAGCGGA1096979
1096980TTTCTAAGCTGCCTGTACGGCAGTAAAGCCAAAGTCTTCCACTTTTGAATTGAGCTGTCT1097039
1097040TTTCTAAGCTGCCTGTACGGCAGTAAAGTCGAATTTGGTACGGCACAAACACAACAATTA1097099
1097100TTTCTAAGCTGCCTGTACGGCAGTAAAGAGAATCGCACAGCATGGGTCTGTTTCTCTACT1097159
1097160TTTCTAAGCTGCCTGTACGGCAGTAAAGGTTCGCGTCACGCAAATCTGCTGATATATCCT1097219
1097220TTTCTAAGCTGCCTGTACGGCAGTAAAGCTTGATGTTAAAGGTGCAGGTGGGATTACTAC1097279
1097280TTTCTAAGCTGCCTGTACGGCAGTAAAG1097307
Left flanking sequence : Till position 1096619 (length bp)
ACCAACACTTTATCACGGATGCATTAAACTGCCTTAGGGCAGTGAACCGGAATATTTCCAACACGGAGTT
GAAAGCCGCTAACGACCATGGACTGTTAAA
Right flanking sequence : From position 1097308 (length bp)
ATAGAGTAAATCAAAAAAGATAAGTTGCAACAAGCTATTAAGGCAGAAAACCTATTTTTACCTTATGAAA
AACAGCTAATCACAACCTACTGTATTTTAT
Print the CRISPR sequence : From position bp To position bp