Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015414_5                                                                                                                 top


Strain : Pseudoalteromonas luteoviolacea GCF_001750405 RefSeq :NZ_CP015414 (chromosome linear)
CRISPR id : NZ_CP015414_5
DR consensus (28 bp) : TTTCTAAGCTGCCTGTACGGCAGTAAAGNumber of repetitions :18
Begin Position : 1098320 End Position : 1099368

1098320CACCTAAGCTGCCTGTACGGCAGTGAACATCAAGACAGCGATATGAACGGAGACGGCAAA1098379
1098380TTTCTAAGCTGCCTGTACGGCAGTGAACGCTTTCCTTTAACTCCTGCAGTTCTTTTGTTA1098439
1098440TTTCTAAGCTGCCTGTACGGCAGTGAACGCACATGCAGTTGTACCATGGTCAAACAGTTT1098499
1098500TTTCTAAGCTGCCTGTACGGCAGTGAACGTACATCTCCATATGCTTTGAATGGACTGTCA1098559
1098560TTTCTAAGCTGCCTGTACGGCAGTGAACACAATAATGTTCTCGTGTTCTTCTTTAATTTT1098619
1098620TTTCTAAGCTGCCTGTACGGCAGTGAACACTCGCGCTGGCAGTCATTGTTTACCTTGATT1098679
1098680TTTCTAAGCTGCCTGTACGGCAGTGAACACGGCATCATCAAGTTGAATCCAGCTCATGTT1098739
1098740TTTCTAAGCTGCCTGTACGGCAGTGAACACGGTTCTAGCAGATGAACTGCAGAAGAAATT1098799
1098800TTTCTAAGCTGCCTGTACGGCAGTGAACACCATGCTTAATTTGTGCGTTTGTATTTGCTA1098859
1098860TTTCTAAGCTGCCTGTACGGCAGTGAACAAAAGCCCCAAGGCTTCGTCTGATGACATGCT1098919
1098920TTTCTAAGCTGCCTGTACGGCAGTGAACGCATTGACCGAAAGACTGGCCGAACCATAAGC1098979
1098980TTTCTAAGCTGCCTGTACGGCAGTGAACTACGCGAAGGCAAGACCGTAACTAATGCGCGA1099039
1099040TTTCTAAGCTGCCTGTACGGCAGTGAACCCCATGTCAAAGTTACTGATAGAAGCTTTTAA1099099
1099100TTTCTAAGCTGCCTGTACGGCAGTGAACGACCTTGAACTTCTTTTGGCAGCTTTTGATAC1099159
1099160TTTCTAAGCTGCCTGTACGGCAGTGAACTGGGTTTAGAAAAGTTGCTTGCCATATTTCAAC1099220
1099221TTTCTAAGCTGCCTGTACGGCAGTGAACCGTTAGAATCTTTAGAGCAAGGGGATGCTTCT1099280
1099281TTTCTAAGCTGCCTGTACGGCAGTGAACGTGACACGGCTTATCACAATCACACCCGCTTC1099340
1099341TTTCTAAGCTGCCTGTACGGCAGTGAAC1099368
Left flanking sequence : Till position 1098320 (length bp)
AGTTCCAATACTGGGCTGAAATCCATCCATGGAGCTTGGTTACATCGGTCATCCATGACCTCACTTCTTC
GCGCTGCGAAACTTCGTTTCGGTCACTCAT
Right flanking sequence : From position 1099368 (length bp)
TATAAATTTCTAACACAAAAACATTTGAATACAAACACCTAACAAAATAATGTAAAAAAAACCTTCTTTT
TTAGGTGGTTTATAACTTATTGATTTTAAA
Print the CRISPR sequence : From position bp To position bp