Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015501_1                                                                                                                 top


Strain : Klebsiella pneumoniae GCF_001644765 RefSeq :NZ_CP015501 (plasmid unnamed circ)
CRISPR id : NZ_CP015501_1
DR consensus (29 bp) : GTATTCCCCCCGTGTGCGGGGGTTATCGGNumber of repetitions :6
Begin Position : 7545 End Position : 7875

7545GTATTCCCCCCGTGTGCGGGGGTTATCGGAGCAACGTTTCCGGATTATATGGCTGGAACG7604
7605TGTATTCCCCCGTGTGCGGGGGTTATCGGTGGTGCTCTCAACCGTCACCCGCTGGCTGGA7664
7665AGTATTCCCCCGTGTGCGGGGGTTATCGGTGGTGCTCTCAACCGTCACCCGCTGGCTGGAA7725
7726GTATTCCCCCCGTGTGCGGGGGTTATCGGTCGTGTTGTCCACGGTTACCCGCTGGCTGGA7785
7786AGTATTCCCCCGCATGCGGGGGTTATCGGAGGTATTTGACCTCATCCAGAAAGGCACAGA7845
7846CGTATTCCCCCGCATGCGGGGGTTATCGC7874
Left flanking sequence : Till position 7545 (length bp)
ATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTA
ATATTTTATAATCAACCGGTTATTTTTAGA
Right flanking sequence : From position 7875 (length bp)
TTAGAGAAGCAAAAAAACCACCGAGGCAGGGGTATTCCCCCGTGTGCGGGGTTATCGGTTACCAATGGGG
AAAAATCTTCATTTGTAAATGTATTCCCCC
Print the CRISPR sequence : From position bp To position bp