Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016440_4                                                                                                                 top


Strain : Bordetella pseudohinzii GCF_001698185 RefSeq :NZ_CP016440 (chromosome circular)
CRISPR id : NZ_CP016440_4
DR consensus (36 bp) : ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACNumber of repetitions :21
Begin Position : 3641563 End Position : 3642916

3641563ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATGTTTATCGTGATCACGATTTTGTCGTGG3641628
3641629ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGCGGTGGTTCTGCGCCGATTAACATTAAT3641693
3641694ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACAGTGATCTTCTTCGTAACATAACGCGCTAC3641759
3641760ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACACTAGCGTTGTAGTTATGTTGCGTGATTGC3641825
3641826ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACCGCATCGACGGACCGCAGATCAGATCATCG3641891
3641892ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACAAGTCGAAGTACAGCATGTTGAGGGACTAG3641957
3641958ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGTATGCCGTATTCGATGCGCCCCCAGCAG3642022
3642023ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTCTTTCACGTCCTTTCCTTGAGAGAGTCCA3642088
3642089ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGGTCGTCACGCCTTCCCGACCGCCGCTGTC3642154
3642155ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACAGTGGCGTTTCAGCTGTCATTCCCGTACCT3642220
3642221ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATCAGTCGCATGAAGCTGCCGCCGTACTGA3642286
3642287ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGGGTGAGGGCGTAGAGGGGAATGTTCATGG3642352
3642353ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTGGAACAAGAAGTGATCGCACCGCCGGAAG3642418
3642419ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTATTTGGATTGGTGCAAGTTCTATCTGGAA3642484
3642485ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTTGCCCGTCATGGACGTGACGGCGCCGTCG3642550
3642551ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATCCATCCGAATTCACTACGGGCCAAGCTG3642616
3642617ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATAGCGATGCAGGGACGGCGCGCGTTGACT3642682
3642683ATTCTAGATCACTGGGAATTGCACTCTAGCCGGAACGGCCGCTCCAGTACCACTCGTGACGAAACT3642748
3642749ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTCAGATGCACTGCTACATCCGCCAGTCCGA3642814
3642815ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACCCTACGCGGGTTCGACTCCCGCAGCCCGCT3642880
3642881ATTCTAGATCACTGGGAATTGCGCTCTAGCTGAAAA3642916
Left flanking sequence : Till position 3641563 (length bp)
AAAGCCCCGGATCAGTTCGATCTTTTCTGACAATGAGCACTCTTTTTTTACTCAGAGAATTGAATAACCC
CCTGATAAATCAGGGGGTTATGGGAACAAC
Right flanking sequence : From position 3642916 (length bp)
AAATTGGCAGACTACCCCACACGGCAGAACGTGAACCTCTTAACGCTCCATTAATCCAAGTCCTGGATCC
TTGATTGTCATTGTGAGCGCAGGCGGAGTG
Print the CRISPR sequence : From position bp To position bp