Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016475_1                                                                                                                 top


Strain : Synechococcus sp. PCC 7003 GCF_001693255 RefSeq :NZ_CP016475 (plasmid unnamed1 cir)
CRISPR id : NZ_CP016475_1
DR consensus (23 bp) : GGTATTTTTTGTCTTACACCAAANumber of repetitions :4
Begin Position : 9619 End Position : 9760

9619GGTATTTTTTGTCTTACACCAAACAGGATCATCACCTG9656
9657GGTATTTTATGCCTTACAAAAATGCGATCGCGATCGCCGCTCA9699
9700GGTATTTTTTGTCTTACACCAAAGACGATCAGCGTCTG9737
9738CGTATTTTATGGCGCACAAAAAA9760
Left flanking sequence : Till position 9619 (length bp)
AATCCGAGGAACGAGGCGGAAATATGGTCAATAAACTTCTCCCCTTGAGGGGAGCTAGAGGGGTGTTCTC
CCCTCTGGGGAGATGCCAATAGGCAGAGGG
Right flanking sequence : From position 9760 (length bp)
ACTGGAAAAATTCTCCCCTGGAGGGGAGTTAGAGGGGTGTAAAACCCAGGAGGAATGAACCATGATGAGT
GTGACCCATGCCATTATTGGCGTTTGTGGC
Print the CRISPR sequence : From position bp To position bp