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CRISPRs details
NZ_CP016476_1
Flanking alignement tool
Page manual
  
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NZ_CP016476_1                                                                                                                 
top
Strain :
Synechococcus sp. PCC 7003 GCF_001693255
RefSeq :
NZ_CP016476 (plasmid unnamed2 cir)
CRISPR id :
NZ_CP016476_1
DR consensus (36 bp) :
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
Number of repetitions :
53
Begin Position :
133101
End Position :
137011
133101
TCTTTCAATCTATTAGCTTCTCAAGTAAAGAGAAAC
ACCCCTCCCACCAGGGCGAGATTGGATTGTTCACCAT
133173
133174
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TTGAAGCAACCAAGTAAGACCTAATCTGATTCCCGCTTCCT
133250
133251
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TGTTGGCATTCGCTGCTACCGTCAATGTGACGTAAAAGCG
133326
133327
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CTCCTGGGTGTCGCTGATCGAGAACCGGAACCTCCTG
133399
133400
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AATTTTAACCATGTTTAACTTCAAAAATCTCTTTTC
133471
133472
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AAACCTAGATTAGTCCGTCAATCTGTCGGTGCAGC
133542
133543
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CACTTTACATGGTCCGCCGTGACATTTTTCATCTTTGG
133616
133617
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
ATGACCGTTTACAAACCAATTGAACTTGGAGGTTCAAA
133690
133691
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CTTCAATAACGAAGTTGATGAGATCATCATTGAGGG
133762
133763
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
ATCGACATTGCTATATTTCCCGCCTACTGACTGGGATGGT
133838
133839
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AGAAAAAGAAATGGAAATGGAGAAAGGGCTGCAAGGGCGTA
133915
133916
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GTAACACACTACAAACAAACAAGGAATTAAAACAAT
133987
133988
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AACCATGAGGATGTGAACTCTGCCCATTTCGACCACCAC
134062
134063
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CTTTTGGAGTCGCTGCGGAACTTTACCAGACATTAG
134134
134135
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
ATTTAGAAAGTGATCAAATGTTCCAAATGCTGCTCATCAAA
134211
134212
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
ATTAGCGTCAAGACAGTTGGAGTTTATGTTGTCGTTAGC
134286
134287
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TGATTATCGCTGCTATTTACGACGGCAAGCGTACCGA
134359
134360
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AGAGGGGTTAACCTTTAAGACTATCATTGTCAACAGC
134432
134433
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TCTGGTCATAAAATCTCTCTCTATGGGGAGAATCAG
134504
134505
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TTGGAGGGCTTATTAATTAACCGTCTCGAAGAGGTACATCA
134581
134582
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AAGGTTCACAAGGCTTCATTCCACAAACACTTGTGGA
134654
134655
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CACGAAGCTGCTGCTCCTGACGGACAAGGTCAAGGAGG
134728
134729
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GAGGTGTCTTATGAAGCCAGTTGGAAAGAAGAAGAGAGCGA
134805
134806
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AGATGATGGAGGACATCATGACTAAAGCGGCTGAACA
134878
134879
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AGAAGCAGGGTCGTACCATCCGCTCCGAAGCGGCAAAAGC
134954
134955
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TCAAACCAGAGGGGATGTTTGATGTCACGGTGCAATTT
135028
135029
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GTGACCGGAGTATATGTACCCTCCCTTCTCTTCA
135098
135099
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CTGATGCTTTCCTGCAGTTACTGCTGGTCTTACGCACT
135172
135173
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GTCGAACTGATCCAACTTCTTCAGCACAATAGAGTG
135244
135245
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CCTCTTTCTGTAGCTTCACTAACAAACTGGGTTGAACACCA
135321
135322
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TCGCTATGACTGGGCCATGGGAATGCTCAATATTGCCATGGACACCCTG
135406
135407
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GCAAGACACCTTGGAGTGCTGGAAGTGGTTGCGTAACA
135480
135481
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TAATCGACCTTTAAAGATGTCATACAGCTTAGACCA
135552
135553
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TTTGGAGGGGAAACCTCGAGTACGGGATCTCTTCCAAT
135626
135627
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TGTAAACAAGATTAGCGGTACTCCTACAAAAAGGGCTGT
135701
135702
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CGTCAACGCCAAAGCTCGCAAGCAATGGCGCAAGGGC
135774
135775
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CAACTTGCCAGATTGAGATTTGAGAGCCTGTGCTTCCTCCAG
135852
135853
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GCCTTCACAATATAGGGCGACTTGCCGAAGAAGAGTATG
135927
135928
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GAAGGACTTTGACAAAACCCTTCGTACTGATGAAGGGTT
136002
136003
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TCAAGGAGTTAGCCGTTTCCCGGAAACGGGTGCAGGATGCTATG
136082
136083
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
ATGAGATCTTTAAGCGATAATTGAAGAAGGCTGTGTCAGC
136158
136159
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GAGATGTTAGAAGCAGCAACCGAGGACATGGAGTCTG
136231
136232
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TCGGTGAGTGTAGCGTTCAAAAGATTCAGTGTGGGGAT
136305
136306
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GGCCGCTAAGAACGCATCTGAGCTTAAAACCTTGGAAAA
136380
136381
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
AAGTTGCGCGACAACCCCAACGTCATTGCCTATATC
136452
136453
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GCCTGGGTATTTTGTCATGACTGTTTACCAAGATGCAAT
136527
136528
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CTAAGCTGCTTGCTCTGGCAACCAAGTGGGCTAAGTCCCACAA
136606
136607
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
GGGGGAATCAGGTTATTTACGACGGCGTTTCTTCATGGT
136681
136682
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TTGTCTACGATGACCCGGAAGACCCTATCGAGGAGGATG
136756
136757
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
TTGTTTATAGTGGGTTTAATAATATGTTCGGTTTTA
136828
136829
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
CCCTTTTTTTAGGAGCATCGCTAATTTGTATACTTTAA
136902
136903
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
ACCTCATGGAACAGACTGAGGATATGGAGTCCGTCAG
136975
136976
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC
137011
Left flanking sequence : Till position 133101 (length
bp)
AAAAAAAAAGAATTGTACAGATTTATTGTACAGCTTCTTTCTAAGCTGATGCAGTCATGACAATTCTGAT
TTGGTGCTCTGCACATAACACAAAATTTGA
Right flanking sequence : From position 137011 (length
bp)
GCTGGTCTTTCAAAAGCTTGTTCGGAGAGAACTCCAGCAAGCATTTGCGACCGATAGCAAAATCTTACCA
GACTCTAAGGAAAAAACCCAATCAAAAATC
Print the CRISPR sequence : From position
bp To position
bp