Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016482_2                                                                                                                 top


Strain : Synechococcus sp. PCC 7117 GCF_001693275 RefSeq :NZ_CP016482 (plasmid unnamed5 lin)
CRISPR id : NZ_CP016482_2
DR consensus (36 bp) : GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACNumber of repetitions :11
Begin Position : 236389 End Position : 237178

236389GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACGCTTAGAATTTGACCAGTTGGTCAATAAGCCATTGC236460
236461GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACAATACAGAACCCTTTTCTGTTCCTTTACATCGTCATGAT236535
236536GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACTTAGTACACATTGAATATGGAGGTATCAACATGTACTTAC236611
236612GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACCCATTGTTACAGTGCAACAAGTTGATTACATCTGTGGCAACAG236690
236691GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACTCAGTAACAGCTGTGTCTAGTAGATAGTGTCTGTAGGTAT236766
236767GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACTTAGATTTTCTAGAAGAAAATTATCAATTTAATTTAATAA236842
236843GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACTTTTCAAGTATTATGGATGGACGAAAGATTTAGATATGA236917
236918GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACCGGTCGAGCTCGTCCCAGTCCACCGGGGTCGAGACCGGT236992
236993GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACAGTTTGTAGATAGGTTCAATCTCTACATCTTCAAAGAA237066
237067GTTTCTCTTTACTTGAGAAGCTAATAGATTGGAAACCTCCTGCAGGTCTTTAACTTGTTGTTGGAGTTGGACAAGA237142
237143GTTTCTCTTTACTTGAGAAGCTAAATTCGATTATCA237178
Left flanking sequence : Till position 236389 (length bp)
ATTTTTTTCTGGCCTTTTCTGTTGGAGCCTGGTAAAATTTTGCTATCGGTCGCAAACGCTCGCTGGAGTC
CTCTCCGGACAAGCGTTTGAAAGACCAACA
Right flanking sequence : From position 237178 (length bp)
TAAGCTTACTAAAATCGCTGAAACTACTGCTATACATAGATTTCAGTGGAAACATCTCAAAATTACCGTA
AGCTTAGACTATTTTTTGTCTACTTTTAAA
Print the CRISPR sequence : From position bp To position bp