Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016666_2                                                                                                                 top


Strain : Neisseria meningitidis GCF_001697745 RefSeq :NZ_CP016666 (chromosome circular)
CRISPR id : NZ_CP016666_2
DR consensus (29 bp) : AAGGTCTAGATTCCCGCCTGCGCGGGAATNumber of repetitions :3
Begin Position : 143927 End Position : 144095

143927AAGGTCTAGATTCCCGCCTGCGCGGGAATAACGGGTCTTTTATAAACTTTGAATATTGCCGTTATCCC143994
143995AAGGTCTAGATTCCCGCCTACGCGGGAATGACGGCATCGGTCTGCCGTTACAACACGGTTTCTTTAGATTTT144066
144067ACGTTCTGGATTCCCGCCTGCGCGGGAAT144095
Left flanking sequence : Till position 143927 (length bp)
ATAGCTTTCCATCATTCCCGCAACTCTTCGTCATTCCCACGAAAGTGGGAATCTAGAATCTCTAAAGCTT
CAGCTAACCTTTGAATATTACTGTTGTTCT
Right flanking sequence : From position 144095 (length bp)
GACGGCGGAGCGGTTGCTGTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACA
GAAAACCAAAATCAGAAACCTAAAATCCCG
Print the CRISPR sequence : From position bp To position bp