CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP017006_5
Flanking alignement tool
Page manual
  
Home Page
NZ_CP017006_5                                                                                                                 
top
Strain :
Sulfolobus sp. A20 GCF_001719125
RefSeq :
NZ_CP017006 (chromosome circular)
CRISPR id :
NZ_CP017006_5
DR consensus (25 bp) :
CTTTCAATCCCGTATGGGATGCATC
Number of repetitions :
42
Begin Position :
2650013
End Position :
2652686
2650013
CTTTCAATCCCGTTTGGGATGCATC
ATGTTGAAGAAAGCCTTACTAAATGACGAATTTATTATAAT
2650078
2650079
CTTTCAATCCCGTTTGGGATGCTTC
CACAACATATCACTGTGGAAACAACAACCATGGACATAT
2650142
2650143
CTTTCAATCCCGTTTGGGATGCATC
CGATAATAGTGTAGAGCTAGAATACATTTGGTACCCCA
2650205
2650206
CTTTCAATCCCTATTGGGATGCATC
GCCACGGCTTACTAGTTTATGTGACAGATAGTGATATTGT
2650270
2650271
CTTTCAATCCCTATTGGGATGCATC
TACGATGAGCCATTAAATTGACCTACAAGAACTGCAAA
2650333
2650334
CTTTCAATCCCTATTGGGATGCATC
AGGATGGAAGTGTAGCTTAAGTCCACCAGGGTATATTTGGTTTG
2650402
2650403
CTTTCAATCCCTATTGGGATGCATC
TAGAAAACATTAAATTTATACCACATACTACTTATAT
2650464
2650465
CTTTCAATCCCTATTGGGATGCATC
TGGTTGAAATAATATCTAGTGGGTAACTCACACAAAAGAA
2650529
2650530
CTTTCAATCCCCATTGGGATGCATC
TTTTATTTTCTTAGTTATTTCTCTAACTGCATAACCTTTT
2650594
2650595
CTTTCAATCCCTATTGGGATGCATC
GTGTAATGTTAATGGCTAAGTTTTCGTTAGTTGAAGGATA
2650659
2650660
CTTTCAATCCCTATTGGGATGCATC
ATGTTGATTGTGTACCAGAAGAGCTGTTCTGGTTCAATCCT
2650725
2650726
CTTTCAATCCCTATTGGGATGCATC
CAAGAATCTCTATATCTAAATCTAGATACTGAAAACTATT
2650790
2650791
CTTTCAATCCCTATTGGGATGCATC
AGACTTGACGCGATACGAATACAGCTAGGACTTACGAA
2650853
2650854
CTTTCAATCCCTATTGGGATGCATC
CCGATGTAGTCTATGGCGCTATTATTGGTGCGTTTGCGAG
2650918
2650919
CTTTCAATCCCGTTTGGGATGCATC
GCAGCAAATAACAGAGGGAATGTATGTGCTGAACTACATA
2650983
2650984
CTTTCAATCCCTATTGGGATGCATC
ACTGATATACCTCTGTCTAAAGATGATGTATATTGGATTA
2651048
2651049
CTTTCAATCCCGTATGGGATGCATC
TTCTCTCTCGTTTTTTCCTCCCTGTGCCGTTAATGGAT
2651111
2651112
CTTTCAATCCCGTATGGGATGCATC
AATTGTGTAAAATCAAAAGTTAGATTTGAAGGGGGTGTAGT
2651177
2651178
CTTTCAATCCCGTATGGGATGCATC
CATGGCGATAAATATGAGACCAATTCCCCTTACCATTTTGA
2651243
2651244
CTTTCAATCCCGTATGGGATGCATC
ATTCGCAAATAGATATCTCGGTAACAACGAATCAG
2651303
2651304
CTTTCAATCCCGTATGGGATGCATC
TATGGGATATCCCATTGTTTATGCGAATAAGCGAGAAATG
2651368
2651369
CTTTCAATCCCGTATGGGATGCATC
TTGAAGATTGTAAGAGATTAACAAACGGCTGGAAATATATT
2651434
2651435
CTTTCAATCCCGTATGGGATGCATC
CTTAGGCGTACCTAATGGAGCACAAAGTAGCCATATTCTTT
2651500
2651501
CTTTCAATCCCGTATGGGATGCATC
GAAATATATTGTAAGTATATTTCAGATAAAGAAATTTGCAA
2651566
2651567
CTTTCAATCCCGTATGGGATGCATC
TTTTACTGGGGAGTAAAATACAAAAAATACGAGGAGTGTGCT
2651633
2651634
CTTTCAATCCCGTATGGGATGCATC
AAAAAACATCATCGACTATATCTCTTACAATTTGATTT
2651696
2651697
CTTTCAATCCCGTATGGGATGCATC
ACTATTGAAGCTACTGTTGGTAGAGTTGCAGAAATCCT
2651759
2651760
CTTTCAATCCCGTATGGGATGCATC
ATTAAGAAGTTTTGAGAATATTATCGATAGGCTTATTGA
2651823
2651824
CTTTCAATCCCGTATGGGATGCATC
TTGAACCAAAAATTAAATTTTCTCTCTCTCATCTCT
2651884
2651885
CTTTCAATCCCGTATGGGATGCATC
TACTAGAGTGTGTTAGTTTTTACTTAGAGGTGGAAAAAA
2651948
2651949
CTTTCAATCCCGTATGGGATGCATC
AAGAAACAACTTGAGGTAATCAGTGTAGCTGAGGTTCCTGCTAT
2652017
2652018
CTTTCAATCCCGTATGGGATGCATC
AGACGAGATAGTGAAGTTAAAGCCAATAAAGGTATACTACA
2652083
2652084
CTTTCAATCCCGTATGGGATGCATC
AATAATCGTCACCGACATCCACCCCTACTACGGGCTAAT
2652147
2652148
CTTTCAATCCCGTATGGGATGCATC
TTGAACCAAAAACGGGCGAGATACTGAGAGAGAT
2652206
2652207
CTTTCAATCCCGTATGGGATGCATC
ACCACCTAATTATTGCGTCTTTCGCGTCTGGGCTCTTCA
2652270
2652271
CTTTCAATCCCGTATGGGATGCATC
CACTCATTTCTCTACGCCTCGGCTAATATATCGTTCTATTTTT
2652338
2652339
CTTTCAATCCCGTATGGGATGCATC
AATGTTGGCAGCAAGACCAATAAGTTTTGAGGAATTG
2652400
2652401
CTTTCAATCCCGTATGGGATGCATC
TTGATAGAGACGTATTTCAAAAAATACCCAGGGCAAGT
2652463
2652464
CTTTCAATCCCGTATGGGATGCATC
GCATATTTTACAAAATCTGGTAAAGAAATGAAATATTGTAAT
2652530
2652531
CTTTCAATCCCGTATGGGATGCATC
ATAAGGCAAGTAGGGAAGAAGTACCAAGCATATCTTTC
2652593
2652594
CTTTCAATCCCGTATGGGATGCATC
CAGATAGAGCCTTTCAACCCAGATGTCTCATCTCTTTTCCCTG
2652661
2652662
CTTTCAATCCCGTATGGGATGCATC
2652686
Left flanking sequence : Till position 2650013 (length
bp)
CTTGCGCTTACTAGGAGTGACGTCGACGTAATGCATGCGGACTTCTGGCTTAAATCCCGTAGCATTAACA
TCTGACCTCTTCCCCGCCTAATGAAAGAAT
Right flanking sequence : From position 2652686 (length
bp)
TGGTTTATTTATTAACCCCTATGCCTTATCTTTTCCTTCCCCTATAATAAATTTTACTTCTATTACCTTT
TCCCTTCATGCGAGGGTTTTTCCTAGTAAT
Print the CRISPR sequence : From position
bp To position
bp