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CRISPRs details
NZ_CP018099_8
Flanking alignement tool
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NZ_CP018099_8                                                                                                                 
top
Strain :
Caldithrix abyssi DSM 13497 GCF_001886815
RefSeq :
NZ_CP018099 (chromosome circular)
CRISPR id :
NZ_CP018099_8
DR consensus (36 bp) :
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
Number of repetitions :
37
Begin Position :
3373049
End Position :
3375860
3373049
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AAAAGGATCGGAACCGATTAAAACCAAAATCGGTTTCGATTTC
3373127
3373128
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TTGTGCGTAGTTAAACAAAAAAGGAGGAGAAAAAATGAAAAA
3373205
3373206
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
ATGGCTTTACGTCGGCTATTGGCCACGTTGACACTGC
3373278
3373279
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
CAATTTGCTACTGACGAGGAAATTAAAAGAGGCCTTGCTATG
3373356
3373357
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
GTGTCTGGTTTTTCTTAAGTGATGAAACATATCGTGGGGTTA
3373434
3373435
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
CCGGCTTGCCGAAGCGGTCGATTTTAACCCTATCAAAGCA
3373510
3373511
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
CCTATTATGTTTATATTGTGTTATCCCCAATCCCACTTCTGA
3373588
3373589
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTTTAC
TATTATCCGGCCCAGCGCCTCAGCCCGGACCGTGAGTGGTTCA
3373667
3373668
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
CTAAAACATGCTCACGAGATTGTTAGAGTTACAGAACATAGAG
3373746
3373747
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
GTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
3373823
3373824
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
ACGTCAACCAAAAGGAGGTTTATTATGGATAAATTTATAGGTATT
3373904
3373905
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
GGGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
3373983
3373984
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
GAATTTTAACCTTGAGGAGAAAAGTCATGGAAAAAGTAATCGT
3374062
3374063
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
GTACGGACGGATCAATGATTATTTATTCTTAAAATTG
3374135
3374136
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AGTACTTAGTGCTCAAGACCTATCCAAAGCATCAGCTGATTA
3374213
3374214
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TGAATAAAGGAGCGACGAAATGAATACTATATATGATG
3374287
3374288
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TGGATTCCTAAGAAGGCGATTGAGTCTATCCAAGAGACTG
3374363
3374364
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AATTATTACCATTGTAAAAGGAGGCAAAAACGGATTACAT
3374439
3374440
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TGTTAGATCAAATCAAAAGAAGAGTAGAAAAAGGAAAATGG
3374516
3374517
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TCCGGAAACCAGTCAGTCGCCATATAAAGCCCCAGCAGCC
3374592
3374593
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AAAAGGAAAATGGTGGGACACCGTAATATTCTACAGCGGTGA
3374670
3374671
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TATAGTGAAGAAAATGAATAAAGGAGCGACGAAATGAATACTA
3374749
3374750
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TTTGAATCCGTTCTTAGACTTATTAATAAAATGATAATAG
3374825
3374826
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
CAGTTAGAATTATTGCAAAAAGGAGATCTTAATGGTAG
3374899
3374900
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TGGCTTTACGTCCGTCGTAGAGCCTTCCCTTCTTTATCCTC
3374976
3374977
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TCTACAGCGGTGATCCTAAGGTGTTTAATCCAGAAACTCA
3375052
3375053
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TTAAAAGAAAAGGAGTAAAAGATGTTAGATCAAATCAAAAG
3375129
3375130
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
ACAGAGAAAAATGCCGAAGCATTACGCAAGCTGGTTAAAAG
3375206
3375207
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
ACGGTTATTAGTGGAAACTCAATTACTGCATGCAGAGAGGGAA
3375285
3375286
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AAGGCAGCAATTTATGCTCGCAATGAGTTCGGAATGCGAAGCG
3375364
3375365
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AAAAATAATTTACAAAGAATTTGAAAAGGGGGGAAA
3375436
3375437
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TAAGTTCTGCCCAGAGTGCGGAGAACCACTGGCTTTTCACG
3375513
3375514
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TATGTACTACTTAGTTTGTCTTTTTGTAGGCTTTCTTTTCG
3375590
3375591
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
TGCCGCAGTATAGCATTTAAAACCGCTTGGCATTCTGAAAAAT
3375669
3375670
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
AAAGGTAACAAATTAGTTACTTACGCAGGGCTTTACCAGA
3375745
3375746
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
ATTTTGGGAAGAAATAGACGATAACGAGCTCCCCAATTCCGGC
3375824
3375825
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC
3375860
Left flanking sequence : Till position 3373049 (length
bp)
CAGTTGTAATTTCGGTCTGCTGTACCCATCTCCCAGATTTTTATTCTGGGATTAGGCAAGAATCTTTCAC
AGGCTCTGAAAAGGATTTCGCTTCGACCGC
Right flanking sequence : From position 3375860 (length
bp)
TCCGGCAGCCGCCAACCCGCTCATATCAGGGATTGACATAGCCTCGTACGCGAACCTTCTTTCTTTTCTC
GTATCTTTTTATCCTATCCCCGCTCCACCT
Print the CRISPR sequence : From position
bp To position
bp