Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP018687_1                                                                                                                 top


Strain : Klebsiella pneumoniae GCF_001908595 RefSeq :NZ_CP018687 (plasmid pKp_Goe_473-)
CRISPR id : NZ_CP018687_1
DR consensus (30 bp) : ACCGATAACCCCCGCACACGGGGGGAATACNumber of repetitions :18
Begin Position : 116666 End Position : 117727

116666CCCGATAACCCCCGCAAGCGGGGGGAATACGCCCTGCACCTGTTTCGCAAAATCCGAACCG116726
116727GCCAATAACCCCCGCATGCGGGGGGAGTACGTGGCGACCACCAGCGTCTTAGTGCAGGGA116786
116787ACCGATAACCCCCGTACGCGGGGGGAATACTATTCAGCCAGTTCTCCTGGGCACCGGGTCG116847
116848GCCGATAACCCCCGCGTGCGGGGGGAATACGAACAGGTCCCAATTCTCCGTCAGCAGCCTC116908
116909ACCGATAACCCCCGCATGCGGGGGGGAATACAGCAGGTGCGCGTCAGAGTGCGCAGGCTCAT116970
116971GGCGATAACCCCCGTAAGCGGGGGGGAATACCATTTTTCAAACAGCCGGATTTTCGATTTGC117032
117033TCCGATAACCCCCGCAGTCGGGGGGGAATACATCACCACACTCATAAATTAACAAAACATTA117094
117095ACCGATAACCCCCGCACACGGGGGGAATACCTGCACTGCCTGTCACTATTCCTCGAACTGC117155
117156TCCGATAACCCCCGCATGCGGGGGGAATACGAAACGACCTGGCGCAGAAACTTCAAATTGT117216
117217TCCGATAACCCCCGCATGCGGGGGGAATACCACCGCCGTTACTTTGCTTTACTCAATCTCG117277
117278GCCGATAACCCCCGCACACGGGGGGAATACAAAAGACGTTTTTATGAAGGTTGCCGTTTTC117338
117339GCCGATAACCCCCGCATGCGGGGAGAATACGCCGCAGTGGATTTCCACTGATGT117392
117393TCCGATAACCCCCGCATGCGGGGGAAATACATTTACAAATGAAGATTTTTCCCCATTGGTA117453
117454ACCGATAACCCCCGCACACGGGGGGAATACTAACACTGTGCAAAAGGTATCCGTGAGGGTG117514
117515CCCGATAACCCCCGCATGCGGGGGGAATACGTCTGTGCCTTTCTGGATGAGGTCAAATACC117575
117576TCCGATAACCCCCGCATGCGGGGGGAATACTTCCAGCCAGCGGGTAACCGTGGACAACACG117636
117637ACCGATAACCCCCGCACACGGGGGGAATACGTACAGGTTCATCAGGATCCGGGGTAAAGTT117697
117698ACCGATAACCCCCGCACACGGGGGGAATAC117727
Left flanking sequence : Till position 116666 (length bp)
TAGGGGCACATGACAAAAGCCCCACCATTGCGGTTTCTATGTCGATACCCCCACATGCTGGGGGAATACA
CCACACTCTCGCAGTGGTTCTCGCTCATGC
Right flanking sequence : From position 117727 (length bp)
TCTAAAAATAACCGGTTGATTATAAAATATTAAATAGCGCCACTAAAATCCACCAGCTTTTGGAGTTAGC
GGGCAGTGAAATCAAAAGATTGATTTTCAT
Print the CRISPR sequence : From position bp To position bp