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CRISPRs details
NZ_CP018702_1
Flanking alignement tool
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NZ_CP018702_1                                                                                                                 
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Strain :
Klebsiella pneumoniae GCF_001908625
RefSeq :
NZ_CP018702 (plasmid pKp_Goe_024-)
CRISPR id :
NZ_CP018702_1
DR consensus (24 bp) :
CCCCCCGCATGCGGGGGTTATCGG
Number of repetitions :
19
Begin Position :
5006
End Position :
6122
5006
CCCCCCGTGTGCGGGGGTTATCGG
TAACTTTACCCCGGATCCTGATGAACCTGTACGTATT
5066
5067
CCCCCCGTGTGCGGGGGTTATCGG
TCGTGTTGTCCACGGTTACCCGCTGGCTGGAAGTATT
5127
5128
CCCCCCGCATGCGGGGGTTATCGG
AGGTATTTGACCTCATCCAGAAAGGCACAGACGTATT
5188
5189
CCCCCCGCATGCGGGGGTTATCGG
GCACCCTCACGGATACCTTTTGCACAGTGTTAGTATT
5249
5250
CCCCCCGTGTGCGGGGGTTATCGG
TTACCAATGGGGAAAAATCTTCATTTGTAAATGTATT
5310
5311
TCCCCCGCATGCGGGGGTTATCGG
AACATCAGTGGAAATCCACTGCGGCGTATT
5364
5365
CTCCCCGCATGCGGGGGTTATCGG
CGAAAACGGCAACCTTCATAAAAACGTCTTTTGTATT
5425
5426
CCCCCCGTGTGCGGGGGTTATCGG
CCGAGATTGAGTAAAGCAAAGTAACGGCGGTGGTATT
5486
5487
CCCCCCGCATGCGGGGGTTATCGG
AACAATTTGAAGTTTCTGCGCCAGGTCGTTTCGTATT
5547
5548
CCCCCCGCATGCGGGGGTTATCGG
AGCAGTTCGAGGAATAGTGACAGGCAGTGCAGGTATT
5608
5609
CCCCCCGTGTGCGGGGGTTATCGG
TTAATGTTTTGTTAATTTATGAGTGTGGTGATGTATTC
5670
5671
CCCCCCGACTGCGGGGGTTATCGG
AGCAAATCGAAAATCCGGCTGTTTGAAAAATGGTATTC
5732
5733
CCCCCCGCTTACGGGGGTTATCGC
CATGAGCCTGCGCACTCTGACGCGCACCTGCTGTATTC
5794
5795
CCCCCCGCATGCGGGGGTTATCGG
TGAGGCTGCTGACGGAGAATTGGGACCTGTTCGTATT
5855
5856
CCCCCCGCACGCGGGGGTTATCGG
CCGACCCGGTGCCCAGGAGAACTGGCTGAATAGTATT
5916
5917
CCCCCCGCGTACGGGGGTTATCGG
TTCCCTGCACTAAGACGCTGGTGGTCGCCACGTACT
5976
5977
CCCCCCGCATGCGGGGGTTATTGG
CCGGTTCGGATTTTGCGAAACAGGTGCAGGGCGTATT
6037
6038
CCCCCCGCTTGCGGGGGTTATCGG
GGCATGAGCGAGAACCACTGCGAGAGTGTGGTGTATT
6098
6099
CCCCCAGCATGTGGGGGTATCGAC
6122
Left flanking sequence : Till position 5006 (length
bp)
AATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATT
TTATAATCAACCGGTTATTTTTAGAGTATT
Right flanking sequence : From position 6122 (length
bp)
ATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGA
AAGTTACTTTCCTGGATAACCCACTTTCTG
Print the CRISPR sequence : From position
bp To position
bp