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CRISPRs details
NZ_CP018763_1
Flanking alignement tool
Page manual
  
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NZ_CP018763_1                                                                                                                 
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Strain :
Pediococcus acidilactici GCF_001922325
RefSeq :
NZ_CP018763 (chromosome circular)
CRISPR id :
NZ_CP018763_1
DR consensus (36 bp) :
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
Number of repetitions :
23
Begin Position :
429771
End Position :
431258
429771
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TCGGACTCTGCATTGTCGTAAACGGCTTGG
429836
429837
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
CAAAAAAAGTTATTATTCCTGCATTGAAAG
429902
429903
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TTACCGTTTTGTTTAGACTTGAAAACTTTA
429968
429969
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
CTTTTCTAGCTGATTACATTACCGGTTTTT
430034
430035
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
AGCGACAGCCGTTATTTACCGGACGAACCG
430100
430101
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TGGCTGAACGTAAGGCTATAGAGAATCGAC
430166
430167
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
CTTATTTGCTCGAAGAACATACTCATCAAT
430232
430233
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TTAGAGCTCGGCTTGTAGCTCCCGAAACTA
430298
430299
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
GGTATTGCTGAATGTTATCAGAGGTCCCTT
430364
430365
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TATCAATGTCCCCAAATGTCCCCAAACAGA
430430
430431
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
GGGAAGTACGCTCCAATGACGCTAAATTAC
430496
430497
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
ATTACTGGTTACATGTTGGCGCATGTTGAC
430562
430563
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TCCCAATTGCCGCTTGCGCAGCGTGACGAG
430628
430629
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
GGCCATTTGCCGAGATTAGAAATGCGGTTA
430694
430695
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
TACCAGCCCACTGTCCAGCAGCACCACCTG
430760
430761
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
CCCAAGGATATCGTTTGACAAATAGTTTTT
430826
430827
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
AAGGATAATAACGCTGCCTTTGTCTATGAC
430892
430893
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
GAACGGATTTCGGAGAATTCCTAAAATCTG
430958
430959
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
AGTCTGGGTTACGTAATGTAAGCCGTGCGG
431024
431025
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
ACTATAGAGGAATGGAACGAGTGCCGACCT
431090
431091
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
CCGAATTAAGCAGACAATTTAGCATTGCTA
431156
431157
GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
AGTCTATAAAGTGATTGATCACCGCACCGA
431222
431223
GTTTCAAAAGGATGCCAAATCCCTAAGGCTAATCAA
431258
Left flanking sequence : Till position 429771 (length
bp)
GGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGT
AATTGATGAAATTTTAGTTAGAAAATAACG
Right flanking sequence : From position 431258 (length
bp)
AAATAGATACGATTATTTATTTAATATTACAATCCTTAAAGTCCCTCCAGCAAAACAACAAGCTACTTGA
TCAAGCGTGACAGCTTTTAAGTAGCTTGTT
Print the CRISPR sequence : From position
bp To position
bp