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CRISPRs details
NZ_CP018888_1
Flanking alignement tool
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NZ_CP018888_1                                                                                                                 
top
Strain :
Lactobacillus amylophilus DSM 20533 = JCM 1125 GCF_001936335
RefSeq :
NZ_CP018888 (chromosome circular)
CRISPR id :
NZ_CP018888_1
DR consensus (28 bp) :
GTTTTCCCCGCACAGGCGGGGGTGATCC
Number of repetitions :
53
Begin Position :
1015304
End Position :
1018503
1015304
GTTTTCCCCGCACAGGCGGGGGTGATCC
TATTGCAAAGACCGCTACTGAAGCGCGGCCGGT
1015364
1015365
GTTTTCCCCGCACAGGCGGGGGTGATCC
TGTTGTAAAAGCTAACGCCGTTAATAGGTTAGA
1015425
1015426
GTTTTCCCCGCACAGGCGGGGGTGATCC
CGGCGCCGGCTACTATGTATACTTTGAACCGTT
1015486
1015487
GTTTTCCCCGCACAGGCGGGGGTGATCC
CGGTAGACCAAGTTATTATTTTGGTGAAAAAGG
1015547
1015548
GTTTTCCCCGCACAGGCGGGGGTGATCC
CGCGGTAGGCCGTGCTAGGTATGACAACGGCGC
1015608
1015609
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCTCATAGTGCCCGTTTTTCTTATATATTGCTT
1015669
1015670
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCTCCACCACTCGCTTAAACTTCGTCTCATCAC
1015730
1015731
GTTTTCCCCGCACAGGCGGGGGTGATCC
CACTAAAAGCAGTCCCGGTACCATAAGATATTG
1015791
1015792
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTGTATTATATAAATATAGAAGAGAGCAGGAGA
1015852
1015853
GTTTTCCCCGCACAGGCGGGGGTGATCC
CCATTCCTCCAAAACGAAAAATGGTCGGAGTTC
1015913
1015914
GTTTTCCCCGCACAGGCGGGGGTGATCC
TACATGGTTTTCACAAACTCATACATTGTTCTC
1015974
1015975
GTTTTCCCCGCACAGGCGGGGGTGATCC
TATGTTACGCCATCATCAATATCATCAGGGAAC
1016035
1016036
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAGTAAGGGCATCGTCAGAGCTCGCAAAGATGG
1016096
1016097
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCTTTTTAGCCAATTGCACTTGCGTAATGCGTT
1016157
1016158
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCAACATTAACCTTAATCTTTGTCATTTAAAGC
1016218
1016219
GTTTTCCCCGCACAGGCGGGGGTGATCC
CACTCAGGAGTACCTAATAAAACAGATTAGTCC
1016279
1016280
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTATCCACGGGCGTTGCGTTGTCATCAGGATTA
1016340
1016341
GTTTTCCCCGCACAGGCGGGGGTGATCC
CAGGCTTGTTATTTAAGGGGGTTGGTTGGCTAT
1016401
1016402
GTTTTCCCCGCACAGGCGGGGGTGATCC
TACTGATTTGTCTTGTGGCGTTATCAGCGTTGC
1016462
1016463
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTTATCAAAGAGGTACCCACAAAGAGAGGATGA
1016523
1016524
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTAAAAAGGCAAACCTCAATCTGGAGGTTAAAA
1016584
1016585
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAATTTCTGTCAAACAATTTATATTAGTTGTTG
1016645
1016646
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTCATGAGGGTGTAGACCGTTCGACAGTCAATG
1016706
1016707
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCATTTCATCTTGGCAGGCTCTGCAGGCTTGAT
1016767
1016768
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTGTCTTCCCCCCTTGGCGTAATTTTGAAGTTT
1016828
1016829
GTTTTCCCCGCACAGGCGGGGGTGATCC
TGCCGCATCGACATCTACCTTGTTTTGCGTAAT
1016889
1016890
GTTTTCCCCGCACAGGCGGGGGTGATCC
CACTAGTGGTTCTTGTAATGGTAGCTTGACCGA
1016950
1016951
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAAATAATTTCCTCTACTCTATCAGACGTCTGT
1017011
1017012
GTTTTCCCCGCACAGGCGGGGGTGATCC
CCATCGCTTCCTATTATACTTTTAACACCATCG
1017072
1017073
GTTTTCCCCGCACAGGCGGGGGTGATCC
TGATACATTGAACCCGTCTGATTTAATGAAACA
1017133
1017134
GTTTTCCCCGCACAGGCGGGGGTGATCC
CATGGTCGTTTTAACGGCGGACGCCGTTATCGA
1017194
1017195
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAATTCCTTTAAATCGTTATAGCCCGTGTAGTC
1017255
1017256
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTGCTAATCCATGGCATATCAATACCGACAATT
1017316
1017317
GTTTTCCCCGCACAGGCGGGGGTGATCC
CTAGTATCTAAACCATAGTAGTTTAGTGTTTTC
1017377
1017378
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAGATATTGTAAGAGAGATAGAGAGAGGGAGAA
1017438
1017439
GTTTTCCCCGCACAGGCGGGGGTGATCC
CGTAGCTTAAAACCTGCTGAATAGTGCCAGACC
1017499
1017500
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCAAGTTAAAAGCTGATGGTTCAAAGGTGGATA
1017560
1017561
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCCGCGCAATGATTTAACAGGTGCAGAGGTTAA
1017621
1017622
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCATACGGGCCGGCGTGTGTGTAGTCGCGCGGG
1017682
1017683
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCATGATAATTCAAAAGTTTTTGAAATGTTTAC
1017743
1017744
GTTTTCCCCGCACAGGCGGGGGTGATCC
CTCCAACTAAAAATTGGATTATCGGAGTTAAAA
1017804
1017805
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCAGGGGTCTAGCAGCAAAGCCACGGCTCAGTA
1017865
1017866
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCGCCAGAGCATTTCTAATTTTCGTGTTGGCAG
1017926
1017927
GTTTTCCCCGCACAGGCGGGGGTGATCC
CAGCAAGCAAGGCTATTATCGACTATGCGTTTA
1017987
1017988
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTACAACCGCTTTTACGGCATTTATGCATAATC
1018048
1018049
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAAGTGTTCGATAAATTTACCTAGATTTTCAAA
1018109
1018110
GTTTTCCCCGCACAGGCGGGGGTGATCC
TTGTGCTAGGCTGGTTGCAGATATTTGTAAGCG
1018170
1018171
GTTTTCCCCGCACAGGCGGGGGTGATCC
TACCGCCCACTTGATGATGTGATATGCCTTGTC
1018231
1018232
GTTTTCCCCGCACAGGCGGGGGTGATCC
TCCACTCAACACCACCAATTCTGCCTTGCACGA
1018292
1018293
GTTTTCCCCGCACAGGCGGGGGTGATCC
TATTCATTATCTTGCCATGTGTAATATGCATCA
1018353
1018354
GTTTTCCCCGCACAGGCGGGGGTGATCC
TAGCACAGTATAAATAATTAGGAGGTCATTCAA
1018414
1018415
GTTTTCCCCGCACAGGCGGGGGTGACTG
ATCAAGTTGAGTGATAAATTTGCGGTTTTCAAT
1018475
1018476
GTTTTCCCCGTACAGGCGGGGGTGATCC
1018503
Left flanking sequence : Till position 1015304 (length
bp)
GCGGAATCAGATGCGCTGGCAACGGCAAAGCTTGCGGATCAACTCATAAAAAATAGTTTACTATATTTTT
AGAATGTTGATTTATAAGGGATCTTTTAGT
Right flanking sequence : From position 1018503 (length
bp)
TTGGTGCCGGAATATTTCAAATCTGATTTTTTAGTTCCCTGTATATACGGGGTGATTCATACACCGATAG
CTTATATCAGTCAGCAATTACAACTTATGA
Print the CRISPR sequence : From position
bp To position
bp