Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP019082_22                                                                                                                 top


Strain : Paludisphaera borealis GCF_001956985 RefSeq :NZ_CP019082 (chromosome circular)
CRISPR id : NZ_CP019082_22
DR consensus (27 bp) : CGAACGAACCCAAACTCGCCAGGGCGGNumber of repetitions :5
Begin Position : 4350052 End Position : 4350388

4350052CGAACGAACCCAAACTCGCCAGGGCGGGAGGGCGGGGGCCGACGCGCGGAATCGGGGGTGTTTTCGAGC4350120
4350121CGAACGAACCCAAACTCGCCGGGGCGGTCTCGTGGGAGCGGCGGGGAGGGCCGGCCGGTCGCCGGGGGGAGGAATGGGGCGTTTTCGGCG4350210
4350211CGAACGAACCCAAGCTCGCCGGGGCGGGAAGGCGGGGGACCGACGCGCGAAATCGGGGGGGCTTTCGAGC4350280
4350281CGAACGAACCCAAACTCGCCGGAAATTCAAGATGCTTCCGGGAAACAGGTTGCGACGGATGAGCGAGGCGGCTCGGGGCTG4350361
4350362CGAACGAACCCAATTCCGGGAGCCGGG4350388
Left flanking sequence : Till position 4350052 (length bp)
AGCGAACGAACCCAATTCCGGGAGCCGCCGGGACGACGTAAAGCCTTTTGCAAAAGAGCGATGAGCCGCG
CAGCCTGAAGTCATGTCGACAGATCCGGCG
Right flanking sequence : From position 4350388 (length bp)
ACGATGGTCGGGGCGGGGGGCGGATCGCGGTCGTCGGTCGAGGGACTCGCGGCGGTTGGTCTTGTCGTTT
TTGCCGGCTGAGGGTTTAATGTCGAAGGAA
Print the CRISPR sequence : From position bp To position bp