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CRISPRs details
NZ_CP019609_1
Flanking alignement tool
Page manual
  
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NZ_CP019609_1                                                                                                                 
top
Strain :
Vagococcus penaei GCF_001998885
RefSeq :
NZ_CP019609 (chromosome circular)
CRISPR id :
NZ_CP019609_1
DR consensus (36 bp) :
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
Number of repetitions :
55
Begin Position :
996432
End Position :
1000035
996432
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ATATTGATAGTTTCGATTGTTTCTTTGCTA
996497
996498
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GAAATAGAAGGATTAGAAGATTGGCGAGAA
996563
996564
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TTGTCAGCAATGATTGAGACGTTATTGTTT
996629
996630
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GGATGCCCAGAAGAAACTTGTAGAAAAATA
996695
996696
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AGTGTACGTGGTATGACAGCGTACGGAGCG
996761
996762
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAATCAGAATTTAGCACTTTCGAGCAGACA
996827
996828
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GCACCTTCTGTCTCTTTAGTCAATTTACGT
996893
996894
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TCCCTATCATCTATCCTTACTCCCCAACG
996958
996959
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ATGTCGGTTTAACTCCAGGCGGTTGGATTA
997024
997025
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ACATTTCGACTCATGCTTGCAATCTCGTTG
997090
997091
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GGAAGTCGCAAACACAAACCTTATGTAGCA
997156
997157
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GCTATGAGAATCAATTAAAAACTACAACTG
997222
997223
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAATGTCGTAGCACTAACGTAGAGTTTATGC
997289
997290
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAAGTGTTCACAAGCAAAGCGCAAGCTAGC
997355
997356
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TGCGTTGCTTCTTCACTAGCTCGATTAACA
997421
997422
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
CAAGAATATGACAACATTAGACAATTAATC
997487
997488
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAATGGTGTAGGAGTGCCTAAGAGCTCACA
997553
997554
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TCGGGCAAACGTTTAAACCACACGTCACCTT
997620
997621
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAACTAGGTTCATCACCTTTTTTGAATTGA
997686
997687
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AGCTAAAGTGTGGGAAATCGAAGACGAGTA
997752
997753
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TAGTATTTTGTTCGTCTAGAAGTTTATTCG
997818
997819
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ACGGAGATATCATCTTAGCTTTACGCTCAA
997884
997885
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
CCTTCTCTTTAACTGATAACTCAAATAGAT
997950
997951
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ACCAGTTGCTGCACCTGTTTCCTCGTCTTT
998016
998017
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
CTGTTTTAGTCGCTCTAGTAGCTCCTGTTAA
998083
998084
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TGTTAATGCCGACTATTTCCTCGCCAACAT
998149
998150
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TGCTTGCTCAGCTTCCATTCCAAATGCTCT
998215
998216
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GTACGCACCAGCTCAAATTGAGTTACAACA
998281
998282
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AATTGAGCTGGATATTGTTTAGTGTTTGTT
998347
998348
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GACTAAACGTGTAACCATTTTCGGTCACAT
998413
998414
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
CAACTCCTGTAGCTTCACCATTAAATGCGT
998479
998480
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TATATTAACTGCTAATCTCAATCGACGCATA
998546
998547
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GGTTAGCCAAATTTGACGCTACAATAGTTA
998612
998613
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TCAAAATCTTGGAATAAATCCAACTCTTCC
998678
998679
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ACTAGTACGTTCATGGCTGATTGAGACTCT
998744
998745
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GTTTAAAATTACCGTTTGCTAAAAGAGTAA
998810
998811
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ACATAACCATACCACCAGTCGCATAGGACA
998876
998877
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TCTAGCGTTTGTATTTGCTCACTTAGTCGT
998942
998943
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TTTGCTCATAGTCTTGGCGGACAAGCAAAT
999008
999009
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TTAAAAATTAATGCGGACGGCACTATCGAT
999074
999075
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GGAGTTTTAAAAGGTGCTTGGGACGGTATC
999140
999141
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ACGTTCCTTTAGCGATAGTAGTTTCTCCAA
999206
999207
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
CGCTGCGCTTCTTTGACTTAAATATCTTTT
999272
999273
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GTTAAAACATCTTTAACTCGTTGTTTTTCT
999338
999339
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ATCGTGATAATCAGTCCCCAAGTCCAACGA
999404
999405
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAGCTAACTCTGGGAATTGCTTCACTCCAT
999470
999471
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AGACGAGATGGTTATGAATGGCGTTTAAAT
999536
999537
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TTCTCAGCAAAAACTTGCTGTAACCGAATT
999602
999603
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
CCTTTGCTTACAGGAATAATGTGATCAATA
999668
999669
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GTACTCAACAGTCGATCTATTTATATTCGT
999734
999735
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
ATGTTAGCTTTAAGCATTTCGAGTCTCGAC
999800
999801
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
GTAAGGAGTGGTTAAACGCAACAGAACTAGG
999867
999868
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
TGACATTTAGCACTACAAAATTTTTGCTTG
999933
999934
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
AAGTGGTACTTGGCTACTGTATAGCAAGCA
999999
1000000
GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC
1000035
Left flanking sequence : Till position 996432 (length
bp)
AGATAATGAAGGTGAAAATAATCTCACATTCATCATCTTAAATAAATCAAAACAGCAATAGCTCTAAAAC
GACGCAGATATTAGAAAGCCTAAAAAGATG
Right flanking sequence : From position 1000035 (length
bp)
CTCGCAGAAAATTTCTCGGTTCCGTAATCGCGCCATTCATCCATAGCAAGATGTCTCTTTTGAATGCTAA
TTTAGTTAGTAGATTATTCTTTTTTCAAGG
Print the CRISPR sequence : From position
bp To position
bp