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CRISPRs details
NZ_CP019870_15
Flanking alignement tool
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NZ_CP019870_15                                                                                                                 
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Strain :
Clostridioides difficile GCF_002007885
RefSeq :
NZ_CP019870 (chromosome circular)
CRISPR id :
NZ_CP019870_15
DR consensus (29 bp) :
ATTTACATACCACTTAGTTAATATAAAAC
Number of repetitions :
6
Begin Position :
2514308
End Position :
2514668
2514308
TATTCTATACATTTTAGTTAATGTAAAAT
TTCTTGATTGTACTCTCTAACTTTTCAACATTATACT
2514373
2514374
ATTTATATACCACTTAGTTAATATAAACC
CCTTAGCTGGTTCTAGTGCTTTTTCTATGATTTTAGTCAT
2514442
2514443
ATTTACATACCACTTAGTTAATATAAAAC
CAATTTAGATGATGTATATGTGCAAAAGGAAGAAATA
2514508
2514509
ATTTACATACCACTTAGTTAATATAAAAC
GGTCACTACAACTTATACTTCCAGTCTAACGATTTGA
2514574
2514575
ATTTACATACCACTTAGTTAATATAAAAC
ATATTTTGGATTTATTAATATAAACATAATTAAAAA
2514639
2514640
ATTTACATACCACTTAGTTAATATAAAAC
2514668
Left flanking sequence : Till position 2514308 (length
bp)
ATCTTAAAACAAAATGATAATTTATCTATATAAAAAAGTGCTTTGTTGACAGAGTTCACTTTTTTATATA
GGTACAGAATTTAAGTATAAATACATGTTT
Right flanking sequence : From position 2514668 (length
bp)
CCCAAAATAAACTGGGCATTTTCAATACTTACACATATGCAACTCTCTTAAATTTGCAGTGAACCATGAG
TAGTGCAAATGATAAAGCTTATCATATACC
Print the CRISPR sequence : From position
bp To position
bp