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CRISPRs details
NZ_LN614756_11
Flanking alignement tool
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NZ_LN614756_11                                                                                                                 
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Strain :
Clostridioides difficile GCF_000953275
RefSeq :
NZ_LN614756 (chromosome circular)
CRISPR id :
NZ_LN614756_11
DR consensus (29 bp) :
ATTTACATTCCATATAGTTAATCTAAAAC
Number of repetitions :
15
Begin Position :
2620234
End Position :
2621185
2620234
ATTTTGAATCCACATAGTTAATCTAAAAC
ACAATTATTAATTGTTTTATTAGTGAAATCACAGCA
2620298
2620299
ATTTACATTCCATATAGTTAATCTAAAAC
ATATAAAATGGGATTAGTAAAAAACACAACAGGAAC
2620363
2620364
ATTTACATTCCATATAGTTAATCTAAAAC
TTTCTTCGTCTTTAGATGATTGTTTTATTGTTCATC
2620428
2620429
ATTTACATTCCATATAGTTAATCTAAAAC
ATTTTTATCACCTGAGATAGTAATAGTCGCTTTGTC
2620493
2620494
ATTTACATTCCATATAGTTAATCTAAAAC
ATAATGTATTGAAAAATCAAATAGGCGTGCAACTTTT
2620559
2620560
ATTTACATTCCATATAGTTAATCTAAAAC
GTATGCTTGTTTATTATATTTATTCAATAGTCATGAGA
2620626
2620627
ATTTACATTCCATATAGTTAATCTAAAAC
CCACGCATTTTAGTTCAAATTCGAAGTTTTTGGCTG
2620691
2620692
ATTTACATTCCATATAGTTAATCTAAAAC
CTATCCTTTCATTCATTTAAAATTTATTCCTTTCAAAT
2620758
2620759
ATTTACATTCCATATAGTTAATCTAAAAC
ACGACGTTGAGATTGCGGAGCTTCTCAACCTTGTACGC
2620825
2620826
ATTTACATTCCATATAGTTAATCTAAAAC
GTTCATCAGATGGATATGCAAATGGAGATATAAAGTT
2620891
2620892
ATTTACATTCCATATAGTTAATCTAAAAC
TTTATATCAGTCTTTTTAGTCGCTGTCTGAATCTCCTC
2620958
2620959
ATTTACATTCCATATAGTTAATCTAAAAC
ACTATCTAAAAGATGATAATAGCTACATTTTGTACGTT
2621025
2621026
ATTTACATTCCATATAGTTAATCTAAAAC
TTGTAGATTTTGTAAGTAATGGTTTTTCGGAAAAAG
2621090
2621091
ATTTACATTCCATATAGTTAATCTAAAAC
AAAATAAGCTATGAAGCTAAAGGAGAAATGAAAGGAG
2621156
2621157
ATTTACATTCCATATAGTTAATCTAAAAC
2621185
Left flanking sequence : Till position 2620234 (length
bp)
GAGGTTTTTACTAATTTTTTCTAATGATTTTACCCAACCGACCAATTTTGAGCAGAATAAAAGCACCTAC
ATATTTGTAAGTGCTTTCTTTGTTTATTTA
Right flanking sequence : From position 2621185 (length
bp)
CCCAAAATAAACTTAGCATTTCCAATACCTACATATATACAATACTCTTAAAATTGCAGTGAGCGGGCAA
TAGTGCAATTGATAACACTTATCACGCACC
Print the CRISPR sequence : From position
bp To position
bp