Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LN999010_7                                                                                                                 top


Strain : Thermococcus chitonophagus 1 GCF_900012635 RefSeq :NZ_LN999010 (chromosome circular)
CRISPR id : NZ_LN999010_7
DR consensus (30 bp) : GTTCCAATAAGACTAGAAGAGAATTGAAAGNumber of repetitions :14
Begin Position : 1642828 End Position : 1643723

1642828GTTCCAATAAGACTAGAAGAGAATTGAAAGGCTGACGTGTTGACGTGGAGCTAATTCACTTTATT1642892
1642893GTTCCAATAAGACTAGAAGAGAATTGAAAGTTTATCAATGCCCCGTACTCCACGTTGGCCTGTTGGT1642959
1642960GTTCCAATAAGACTAGAAGAGAATTGAAAGGTTTGGGTTGATAGCGGTCTTGGCAATAATTGCGG1643024
1643025GTTCCAATAAGACTAGAAGAGAATTGAAAGTATGTGAAAGTCTCAACTACAGGTCTAACACTTAAT1643090
1643091GTTCCAATAAGACTAGAAGAGAATTGAAAGGAGCTTGTGGTTGTTGTTGGGGTTGGGGCCGGGGTT1643156
1643157GTTCCAATAAGACTAGAAGAGAATTGAAAGGAAGATGCCCTTGAACCTCAGTACCTTGCCACTCTC1643222
1643223GTTCCAATAAGACTAGAAGAGAATTGAAAGCAGGGTTCAACGATTGATTCTGCTGATTGGAAGGCT1643288
1643289GTTCCAATAAGACTAGAAGAGAATTGAAAGCAGTTAGATTTTCGATTGGAGGAACTATACTGATTGT1643355
1643356GTTCCAATAAGACTAGAAGAGAATTGAAAGGCATCCGTTGAGGACGCGGAAAGAGTCGAGGAGCTGATCGC1643426
1643427GTTCCAATAAGACTAGAAGAGAATTGAAAGGATTTCTCTTTTCTTTGGGGGTGTCACTATGGTGGAG1643493
1643494GTTCCAATAAGACTAGAAGAGAATTGAAAGAGCACACCCCGGTGTAGCGCTGGTAGATCTCGGTCAC1643560
1643561GTTCCAATAAGACTAGAAGAGAATTGAAAGGACGGGTGAGATAGTAGAACAGATGGCCATACCAGTT1643627
1643628GTTCCAATAAGACTAAAAGAGAATTGAAAGACGTTTGGTTCAGTCTTCACACTGAAGGATGGTAGT1643693
1643694GTTCCAATAAGACTAAAAGAGAATTGAAAG1643723
Left flanking sequence : Till position 1642828 (length bp)
ATATTTTCATAGGGTTTTCATAACTCCCCTTCAGCAAAAAGCTTATATTAATAGGGACACCTTAGAAGAG
TTTAGACGAAACGAGAGAAAAATCGCGCCT
Right flanking sequence : From position 1643723 (length bp)
CGAGCCAAATACTCATAGGTTCTAACTGGGAAAATAATGAAAAACATCCATATTTATTTAATTAGCTTGG
CTATTTTCCTGGATAATTCATCAAGAAAAG
Print the CRISPR sequence : From position bp To position bp