Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LT629973_4                                                                                                                 top


Strain : Akkermansia glycaniphila GCF_900097105 RefSeq :NZ_LT629973 (chromosome circular)
CRISPR id : NZ_LT629973_4
DR consensus (32 bp) : GTCGCACCCCTCGCGGGTGCGTGGATTGAAACNumber of repetitions :15
Begin Position : 2800145 End Position : 2801104

2800145GTCGCACCCCTCGCGGGTGCGTGGATTGAAACCGGAAAACCGTCACATCAAGCCACACGTCATCCC2800210
2800211GTCGCACCCCTCGCGGGTGCGTGGATTGAAACGCGAGATATGGTTGACAAAGGACGGGAATGCGCC2800276
2800277GTCGCACCCCTCGCGGGTGCGTGGATTGAAACAACATCAGAAATATCGTGCGAGCATACGATAGCG2800342
2800343GTCGCACCCCTCGCGGGTGCGTGGATTGAAACAACACAGGCATCATGGAGATGCAGCGTGCGACGAA2800409
2800410GTCGCACCCCTCGCGGGTGCGTGGATTGAAACACCGATACCCGCGGCCGCCGCTTCGAGTTCGGCCG2800476
2800477GTCGCACCCCTCGCGGGTGCGTGGATTGAAACTCCGATGGTCAGCCAATTGCCCAGTACATCACAA2800542
2800543GTCGCACCCCTCGCGGGTGCGTGGATTGAAACTTGAGGTGCTGACCGCCAGTCGCAAGCTTGTCATG2800609
2800610GTCGCACCCCTCGCGGGTGCGTGGATTGAAACCGATGATGCGGGAAAACGTGTCGGGCGTGGAGG2800674
2800675GTCGCACCCCTCGCGGGTGCGTGGATTGAAACGGGTACTGCACGACATTGCGTATGCCTGCCGACG2800740
2800741GTCGCACCCCTCGCGGGTGCGTGGATTGAAACCCGCTGCCTGTCGCAGCCTCTGCTAGAACGGAAT2800806
2800807GTCGCACCCCTCGCGGGTGCGTGGATTGAAACCCGGTCGGGGAATCCCGCACGTATTCCCGGTCGC2800872
2800873GTCGCACCCCTCGCGGGTGCGTGGATTGAAACTTGAGGTGCTGACCGCCAGTCGCAAGCTTGTCATG2800939
2800940GTCGCACCCCTCGCGGGTGCGTGGATTGAAACTGTTGTCGATGGCTTCTTCGATCATGTCCACGAA2801005
2801006GTCGCACCCCTCGCGGGTGCGTGGATTGAAACACGGACTCATATCGCAACGGCAGCAACATGGCCAA2801072
2801073GTCGCACCCCTCGCGGGTGCGTGGATTGAAAC2801104
Left flanking sequence : Till position 2800145 (length bp)
ACAAGCCCGCTTTATGAAGTTGTCAAATAATGTATATTGACAGCTCGTCGGCGGAAATAAAGGAATTGCC
TCTTTGGTGACAACATGTTACAAAGTGGCA
Right flanking sequence : From position 2801104 (length bp)
GACGGCGAGGATGGCATCCGTGGCGTTGCAGGCTGTCGCACCCCACGCGGTTGCAGCGGGGTTGCAGCGG
GGTTGCAGCGGGGTTGCAGCGGGGTTGCAG
Print the CRISPR sequence : From position bp To position bp